Caulobacter vibrioides CB15: CC_3098
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Entry
CC_3098 CDS
T00049
Name
(GenBank) heat shock sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ccr
Caulobacter vibrioides CB15
Brite
KEGG Orthology (KO) [BR:
ccr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccr03021
]
CC_3098
Transcription machinery [BR:
ccr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CC_3098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
DUF3431
GntR
HTH_28
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AAK25060
UniProt:
P0CAW9
LinkDB
All DBs
Position
3329617..3330513
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AA seq
298 aa
AA seq
DB search
MSKMAVNSLSVMSPDGGLSRYLTEIRKFPMLSKDEEFMLAQRWKEHQDPQAAHKMVTSHL
RLVAKIAMGYRGYGLPIGEVISEGNVGLMQAVKKFEPEKGFRLATYAMWWIRASIQEYIL
RSWSLVKMGTTAAQKKLFFNLRKAKSQIAAFQEGDLHPDQVSQIATKLGVLDSEVISMNR
RLSGPDASLNAPLRADGESEWQDWLADEEQVSQETRVAEDEEKSLRMSLLEEAMVELTDR
ERHILTERRLKDDPTTLEELAAQYGVSRERVRQIEVRAFEKLQKTMREAAIAKNMVDA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagatggccgtgaattctctatcggtgatgtcgccggacggcggcttgtcgcgt
tacctcaccgagatccgcaagttcccgatgctcagcaaggacgaagagttcatgctggcc
cagcgctggaaagagcatcaggatccgcaagcggcccacaagatggtcaccagccacctg
cgcctcgtagccaagatcgccatgggctaccgcggctacggcctgccgatcggcgaggtg
atctccgagggcaatgtcggcctgatgcaggcggtcaagaagttcgagcccgaaaagggc
ttccgcctggcgacctacgccatgtggtggatccgcgcctcgatccaggaatacatcctg
cgctcgtggtcgctggtgaagatgggcacgaccgccgcgcagaagaagctgttcttcaac
ctgcgcaaggccaagagccagatcgccgccttccaggaaggcgacctgcaccccgaccag
gtcagccagatcgccaccaagctgggcgtgctggacagcgaagtcatctcgatgaaccgc
cgcctgtcgggccccgacgcctcgctgaacgcgccgctgcgcgccgacggcgagagcgag
tggcaggactggctggctgacgaggagcaggtctcccaggagacccgcgtcgccgaggac
gaggaaaagtcgctgcggatgtcgcttctggaagaggcgatggtcgagctgaccgaccgc
gagcgtcacatcctgaccgagcgccgcctgaaggacgatccgaccaccctggaagaactc
gccgcccaatacggcgtcagccgcgaacgcgtgcgccagatcgaggtccgcgcgttcgag
aagctgcagaagaccatgcgcgaggcggcgatcgccaagaacatggtcgacgcctag
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