Caulobacter vibrioides CB15: CC_3315
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Entry
CC_3315 CDS
T00049
Name
(GenBank) sigma-54 dependent DNA-binding response regulator
Organism
ccr
Caulobacter vibrioides CB15
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA
HTH_7
HTH_17
RWP-RK
Mg_chelatase
AAA_16
OKR_DC_1_N
TetR_N
HTH_22
HTH_23
FleQ
HTH_29
IstB_IS21
CENP-B_N
AAA_2
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
AAK25277
UniProt:
Q9A389
LinkDB
All DBs
Position
3564265..3565731
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AA seq
488 aa
AA seq
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MTKTVLVVDDDPTQRRLIQAVLERDGFAVSHAEGGDAAIAHLTSGAPADVILLDLVMPGL
NGQDALKEMRARGFNQPVIVLTASGGVDTVVKAMQAGACDFFIKPASPERITVSIRNALS
MGDLKGEVERLTKRAGGKTTFADLIGASPVMTMVKRMGERAAKSGIPVLITGESGVGKEL
IARAVHGSSDRAGKPFVAVNCGAIPENLVESILFGHEKGSFTGATDKHLGKFKEADGGTL
FLDEVGELPLDMQVKLLRALQEGEIDPIGSKRSIKVDVRIVSATNRDLQQAVSGGRFRED
LFYRLNVFPIEAPSLRERREDIPALVEAFIRRFNVEEGKRVIGASPETMQLLTSFDWPGN
VRQLENTVYRAIVLADAPYLQPFDFPAISGLAAPIEAVSISPSPPPAALLQATHAAMAAA
VAEAPVRILDDRGHLRTLEEIERDLIQHAIDVYAGHMSEVARRLGIGRSTLYRKVREQGI
EVDMKEAG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaacggtccttgtcgtcgatgacgacccgacacaacgtcggttgattcaagcg
gtgctcgagcgcgacgggttcgcggtctcgcacgcggaaggcggcgacgcggcgatcgcg
cacctgacgtccggcgcgcccgccgatgtcatcctgctggatctcgtcatgcctggcctc
aacggtcaggacgccctgaaggaaatgcgcgcccgcggcttcaaccagcccgtgatcgtg
ctgacggccagcggtggcgtcgacaccgtggtcaaggccatgcaggccggcgcctgcgac
ttcttcatcaagcccgcctcgcccgagcggatcaccgtgtcgatccgcaacgccctgtcg
atgggcgacctcaagggcgaggtcgagcggctgaccaagcgcgcgggcggcaagaccacc
ttcgcggacctgatcggcgcctcgccggtcatgaccatggtcaagcgcatgggcgagcgg
gccgccaagagcggtatcccggtgctgatcaccggcgaaagcggcgtcggcaaggagctg
atcgcccgcgccgtccacggctcttccgaccgcgccggcaagccgtttgtcgcggtcaac
tgcggcgcgatccccgagaacctcgtcgagtcgatcctgttcggccacgagaagggctcg
ttcaccggcgccaccgacaagcatctgggcaagttcaaggaggccgacggcggcaccctg
ttcctcgatgaggtcggcgagctgccgctcgacatgcaggtcaagctgctgcgcgccctg
caggagggcgagatcgacccgatcggctccaagcgctcgatcaaggtcgatgtccggatc
gtgtcggcgaccaatcgcgatctgcagcaggccgtttcgggcggccggttccgcgaagac
ctgttttatcgcctgaacgtgttcccgatcgaggcgccgtccctgcgcgagcgtcgcgag
gacatcccggccctcgtcgaggcgttcatccgccggttcaacgtcgaagaaggcaagcgc
gtgatcggcgcctcgcccgagacgatgcaactgctgaccagcttcgactggcccggcaat
gtgcgccaactggaaaacaccgtctatcgcgccatcgtgctggccgatgcgccctatctg
cagccgttcgacttcccggcgatctcgggcctggccgcgccgatcgaggccgtatcgatc
tcgccctcgccgccgcctgcagccctgttgcaagccacgcatgcggcgatggccgccgcc
gtcgcagaggcgcctgtgcgcatcctcgacgatcgcggtcacctgcggaccctggaggag
atcgagcgcgacctcatccagcatgcgatcgacgtctatgccggccacatgagcgaggtc
gcgcggcgtttgggcatcggtcgctcgaccctctatcgcaaggttcgcgagcagggcatc
gaagtcgacatgaaggaagcgggctga
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