Colias croceus (clouded yellow): 123690838
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Entry
123690838 CDS
T08651
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123690838
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
123690838
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
123690838
NCBI-ProteinID:
XP_045490873
LinkDB
All DBs
Position
4:complement(11465331..11522863)
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AA seq
1789 aa
AA seq
DB search
MTHQNHQTNGASLEDCHTNFFALTELHGIKWRKLVWGETSGGGDGEDGAAPLADPVISSY
ARCLAGDILCVWRRVPAPQPLDFDMAMPAPPPLSLRASKELWIFWYGEEPDLTGLVAPEL
MESQGDQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFVQPYDGDEEDVGKS
SPWHLSFSFAFFLHGESTVCASVDVRQHPPVRTLTAKRRARLHAPPPHAQPDNKVILAPF
GLEGRVTGREWSDSEPATARLLDAWRQLYPLEQACGAVEVECGGVRMRYPVPYVLVTEME
AGSGAAPPARQLAARTLRSLATPAPHQTAEACYADAAGDSSEDFVDPTRKAPCSCAKWRR
RRAPRPLPFHRRAARAAPRARPAGCGGANGRGTCSPASCGGASPAAPGSAPSPHHTAIPS
HQGPNVPTTLHTPAPTPDPLAPPTPAPPSHHHQGPAGATPGPPAPLPRRPLLPAAEKRLD
PLEDEHELHMLYDYSTVHAWLEHPVKRFKSDENTFREELALGVSGGDLYAGQEYTRPPDC
VHADRVDVKHEKVEPEDIKDYKNLFRSDGLCPTFKDLEQIFDNSDDAASGDETVRLLQVQ
TPPDSNKSSEVRCVRAEELSKMFPTPPSMEAHAQPSPGFCPPDELPVGALTRHGSPPRDP
IEDWSYVFKPATVYKYVGSSKYAPLTALPSQLLPPVALPPHAVYRPRWQHDPEPAAAARG
AAAARRVPPATGGVKRSISTAAERTPAGVTSARGGAGAAGPNTASPRRAAPASPASPRAP
APACPLLLNVLLADTVLNVFRDHNFDSCTLCVCNAGGRSVGNIRGADASTYLPGVEWGGG
AEDEPAHCSCGFSAVVNRRLAHRAGLFYEDELEITGVAEEPRVRCGGGGGGAGAAGGGLG
DVAGVLVAQCAAPAGGSASALARAARRAAGKHAPPHDDHRLNLLEYSDGGAAAMCALRAA
AGGALAQPKTTNGITSGAVHRWPFIGARAPRSSRDVVRLMRRLRPLLQDAIQKRCAGARM
WDGVTGPLTWRQFHLLAGRGNEDRCEPQPVPPLLVGYDRDWLSLSPYALRHWERLALEPY
SYSRDVAYVVLAADGEALSEPLRAFFRELSAAYEACRLGRHQPISRIARDGIVRTAPADV
DRDTNCEEWTGELPPGRLGEYVRAYADTMRANLVPQLAALSVDKTLFESNNSTGAMRPPA
APDRPDTPSGAGGASGGNSSEHEDAGTGGASSTGTLGAAWEEDEGGPPALVLYVVEPPAA
HAHRPRALHALLRLVAQAYNHLHHHNPLIKLISLEGVCETWCGGGGAGGGAGLGAELRAL
AFSVFAGTRRLLAHAPNGKSLTGFGTAANANLFLSSKDEKNRAAYRLFSPAWVLAPPRAP
KEVAETWGQAGGEHGAVLYVAYCLSHDQRHLLAAATDARGELLDTAAINIHVPARSRRKR
GGPARRLGLTKLMDFTLGVMSQSAQPWRLVVGRVGRIGHGELKGWSWLLSRPNLNRASNT
LREMCGSCSLLYPSGAPCILSACLVSTEPDSCLRLMADRFTPDERFSKASIQSHLHTPRD
VTATHILVFPTSATTQSNQMPYEQPTANGEENELLLGLEMVDEEMGEVQMTDLLIGDMFT
CWQGSPRASPRRDDETSRDGSPQRLHPAAAPGHYPREDDHQPEQVGTVLQQPLALGYLVS
TAPLGAMPGWWWAGCAHLRDACPAFLKNALHLQCSAPPHDDYVAITQRRDHNAHPLDSTT
TTDVLRYVLEGYNALSWLALDGTTHDRVSCLPLHVQVLMQLYHTAAALG
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatcaaaatcaccaaacaaacggtgctagtctcgaggattgccacacaaacttc
tttgccttgactgaactccacgggataaaatggcgtaagctggtatggggcgagacgagc
ggcggcggggacggcgaggacggcgcggcgccgctcgccgacccggtgatcagcagctac
gcgcgctgcctcgccggcgacatcctgtgcgtgtggcggcgcgtgccggccccgcagccg
ctcgacttcgacatggccatgcccgcgccgccgccgctctcgctgcgcgcctccaaggag
ctatggatcttctggtacggcgaggaacccgacctgaccggcctcgtcgcgcccgaactc
atggagagccagggcgaccaaggatcctgggaaagcggactgtcgtacgagtgtcggtcg
ttgcttttcaaggcgctgcataatctcatcgagagatgtctgctgtcgcgcgacttcgtg
cggctcggcaagtggttcgtgcagccctacgacggcgacgaggaggacgtcggcaagagc
agcccgtggcacctgtcgttctcgttcgcgttcttcctgcacggcgagagcacggtgtgc
gcgtcggtggacgtccgccagcacccgccggtgcgcacgctcaccgccaagcggcgcgcg
cgcctgcacgcgccgccaccgcacgcgcagccggacaacaaggtgatcctggcgccgttc
ggtttggaggggcgcgtgacgggccgcgagtggagcgactcggagccggccaccgcacgc
ctgctcgatgcttggcggcagctctacccgcttgaacaggcctgcggcgctgttgaggtg
gagtgcggcggcgtgcgcatgcgctacccggtgccgtacgtgctggtgacggagatggag
gcgggcagcggcgccgcgccgcccgcgcgccagctcgccgcgcgcacgctgcgctcgctc
gccacgcccgcgccgcaccagacggcggaggcttgctacgcggacgcggcgggtgactcg
agcgaggacttcgtggacccgactcgcaaagcgccctgctcctgcgccaagtggcggcgc
cggcgcgccccgcgcccgctgcccttccaccgccgagccgcgcgcgccgcgccccgcgcc
cgccccgccgggtgcggcggcgcgaacgggcgcggcacgtgctcgccggccagctgcggg
ggcgcttcgcccgccgcgccgggctccgccccctcgccgcaccacaccgccataccttcc
caccagggccccaacgtgccgacgacgctgcacacgccggcgccgacgcccgacccgctg
gcgccgcccacacccgcaccgccttcgcaccaccaccaggggccggcgggcgcgaccccc
ggcccgccggccccgctgccgcgccgcccgctgctgcccgccgccgagaagcggctcgac
ccgctcgaggacgagcacgagctgcacatgctgtacgactacagcaccgtgcacgcctgg
ctcgagcaccccgtgaagcgtttcaagagcgacgagaacacgttccgcgaggagctggcg
ctgggcgtgagcggcggcgacctgtacgcggggcaggagtacacgcgcccgccggactgc
gtgcacgcggaccgcgtcgacgtcaagcacgagaaggtggagccggaggatataaaagac
tacaagaacctatttcgatcggacggcctgtgcccgacgttcaaagacctggagcagata
ttcgacaactcggacgacgcggccagcggtgatgagacggtaagacttttgcaagtgcag
acgccgccggactcgaacaagtcgtcggaggtgcggtgcgtgcgcgccgaggagctgagc
aagatgttcccgacgccgcccagcatggaggcgcacgcgcagccctcgcccggcttctgc
ccgcccgacgagctgcccgtaggcgcgctcacccgccacggcagcccgccgcgcgacccc
atcgaggactggtcgtacgtgttcaagccggcgacggtgtacaagtacgtgggctcgtcg
aagtacgcgccgctcacagcgctgccgagccagctgctgccgcccgtggcgctgccgccg
cacgccgtgtaccgcccgcgctggcagcacgaccccgagccagctgctgccgcccgtggc
gctgccgccgcacgccgtgtaccgcccgccacgggcggcgtgaagcgctcgatctctacg
gccgcagagcgcacgcccgccggcgtcacctcagcgcgaggcggcgcgggcgcggccggc
cccaacaccgcctcgcctcgccgcgcggcgcccgcctcgcccgcctcgccgcgcgcgccc
gcgcccgcctgcccgctgctgctcaacgtgctgctcgctgacaccgtactcaacgtgttc
agagatcacaactttgacagttgcacgctgtgcgtctgcaacgcggggggacggagtgtg
ggcaacatccgcggcgcggacgcgtctacgtacctgcccggcgtggagtggggcggcggc
gcggaggacgagccggcgcactgctcgtgcggcttcagcgctgtggtcaaccgccgcctt
gcgcatcgagccggcctcttctatgaggacgagttggagatcacgggcgtggcggaggag
ccgcgggtgcggtgcggcgggggcgggggcggcgcgggcgcggcgggcggcgggctgggc
gacgtggcgggcgtgctggtggcgcagtgcgcggcgcccgccggcggcagcgcgtcggcg
ctcgcgcgggccgcccgccgcgccgccggcaagcacgcgccgccgcacgacgaccaccgg
ctcaacctgctcgaatactctgatggcggcgcggcagcgatgtgcgcgctgcgtgcggcc
gcgggcggtgcgcttgcgcagcccaagaccacaaacggcattacctccggcgccgtgcac
aggtggccattcatcggtgcacgggcgccgcggtcatcaagggatgttgtcagactgatg
cggcggctacggccgctgctgcaggacgcgatccagaagcggtgcgcgggcgcgcgcatg
tgggacggcgtgacgggcccgctgacctggcgccagttccacctgctggcgggccgcggc
aacgaggaccgctgcgagccgcagcccgtgccgccgctgctggtcggctacgaccgcgac
tggctctcgctctcgccctacgcgctgcgccactgggagcggctcgcgctcgaaccctac
tcatatagtcgagacgtggcgtacgtggtgctggcggcggacggcgaggcgctgtcggag
ccgctgcgcgcgttcttccgcgagctgtccgccgcgtacgaggcgtgccggctcggccgc
caccagcccatctcgcgcatcgcgcgcgacggcatcgtgcggaccgcgcccgcggatgtc
gaccgagacacgaattgcgaagaatggacgggcgagttaccaccggggcggctgggcgag
tacgtgcgcgcgtacgcggacacgatgcgcgccaacctcgtgccgcagctggccgcgctt
agtgtagacaagacgttattcgaatcaaacaacagtacgggggcgatgcgaccgcccgcc
gcgcccgaccggccggacacgccgagcggcgcgggcggggcgagcggcggcaacagcagc
gagcacgaggacgccggcacgggcggggccagcagcacgggcacgctgggcgccgcgtgg
gaggaggacgagggcgggccgcccgcgctcgtgctgtacgtggtggagccgccggctgcg
cacgcgcaccgcccgcgcgcgctgcacgcgctgctgcgactcgtcgcgcaggcgtacaac
cacctgcaccatcacaacccattgatcaagctgatctcgctggagggcgtgtgcgagacg
tggtgcggcggcgggggcgcgggcggcggcgcggggctcggcgcggagctgcgcgcgctc
gccttcagcgtgttcgcgggcacgcgccgcctgctcgcgcacgcgcccaacggcaagtcg
ctcaccggcttcggcaccgctgccaacgctaacctcttcctatcctctaaagacgagaag
aaccgcgccgcgtaccgtctgttctcgccggcgtgggtgctggcgccgccgcgggcgccc
aaggaggtggcggagacatgggggcaggcgggcggcgagcacggcgccgtgctgtacgtg
gcgtactgcctgtcgcacgaccagcgccacctgctggccgccgccacggacgcgcgcggc
gagctgctcgacaccgccgccatcaacatacacgtgcccgccagatcgcgaagaaaacgc
ggcggtccggcgcggcggctggggctgacgaagctgatggacttcacgctgggcgtcatg
tcgcagtcggcgcagccctggcgcctcgtcgtgggccgcgtgggacgcatcggacatggg
gagcttaaaggctggagctggctgctgtcgcggccgaacctgaaccgcgcgtcgaacacg
ctgcgcgagatgtgcggcagctgctcgctgctgtacccgagcggcgcgccgtgcatcctg
tccgcgtgcctcgtgtccacggagcccgactcgtgcctgcgcctcatggccgaccgcttc
acgcccgacgagcgcttctccaaggcctccatccagtcgcacctgcacacgccgcgcgat
gtcaccgccacgcacatactcgtcttccccacctccgctactacgcagtcgaaccagatg
ccgtacgagcagccaacagcgaacggcgaggagaacgagctcctgctcgggctggagatg
gtggacgaggagatgggcgaggtgcagatgacggacctgctgatcggcgacatgttcacg
tgctggcagggcagcccgcgcgcctccccgcgccgcgacgacgagaccagccgcgacggc
agcccgcagcgcctgcaccccgccgccgcgcccgggcactacccgcgcgaggacgaccac
cagccggagcaagtgggcacggtgctgcagcagccgctggcgctgggctacctggtgtcg
acggcgccgctgggcgcgatgccgggctggtggtgggcgggctgcgcgcacctgcgcgac
gcgtgccccgccttcctcaagaacgcgctccacctgcagtgcagcgcgccgccgcacgac
gactacgtggccatcacgcagcgccgcgaccacaacgcgcacccgctcgactccaccacc
accaccgacgtgctcagatatgtgctggaaggctacaacgcgctgtcgtggctggcgctg
gacggcacgacgcacgaccgcgtgtcgtgcctgccgctgcacgtgcaggtgcttatgcag
ctgtaccacacggccgcagcgctcggctga
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