Colias croceus (clouded yellow): 123690856
Help
Entry
123690856 CDS
T08651
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123690856
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
123690856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
123690856
NCBI-ProteinID:
XP_045490896
LinkDB
All DBs
Position
4:6919323..6934587
Genome browser
AA seq
1975 aa
AA seq
DB search
MNERDIPSVPITTLAGVASLTDLLPVLPLPTPLPSTLNNKSQLFHPRVAEEAAILLATRD
DNLVSLLLQSLMQTSVQHIDLKDETIPNAVSPAPQQSTPELLKAILNVNPNVFDQQPSNH
WGNHLNTSKFNGMSPSPTFNYTSHSTVHSSPSSHGTAVHSGPIPNQQLLATPCQSSPHVN
IGSPPSQARPGSQVNITAQNNISPPWNSANQSNTYTSPLANSANPQNGGFYNSLLQENRS
FGTNIGEDKDPLSMSPSNIPEQQQLMQSQDKVFGQGLNNSLEGGGVMTGQSPAQASVAPS
PLRQEPQVPQPSMGAPYAPPLATAQEKDQSKSASAVNSRYPVVKIGRLSEGLLKKHEFTG
DERVRKNSTVESDSDDNIPLKAKSKQKQNISKPVDKEREAIDMAREKNWEAVKRKHEEAS
KKEEEETSIVRPKLRKVERRLVPVLEMLSVDELMETNTYQRFNKLIDAVFETIDDDVIIT
EEMEGPDIPEELLLPRYQIQELCSEAAKLKNLGAMEAIPADRLVRLLNILEKNIRAAEKM
SLVGDPDDSEEMRQIWLESALERVMCASDACLTALYIMTSPSMPKRIYLEDVIDRIVMFI
KFQLNNTIYCVYDPVYSIQITSKKKVDGRKRRGGGASHAKQRSGNSNRAVRELYTHAHEC
VTLLGELFAAHHLTDTTVLHASTVAVSPFFVENISELQLSALKLVTTIFTKYEQHRRLLL
EDILASIARIPSSKHNLRSFQLSSDQHIQMLTALVLQLVQCVVTLPETLCKSQDKDKEVE
SESKKHVDKDLLIISRYEAAISVGGTFLTSFLNKCRSRTEEVDFRPLFENFVHDLLTTVN
KPEWPATELLLSLLGTMLVKYMSDKSMEMPVRVASLEYLGLVASRLRRDSVHSRAKLSTM
DAVVRDIRAEEEKDGSQGHTPSSGLDEDEQRTEFLQRVLLDYLAINGQKDQAWNCARHFY
ITQWYRDMVVQPKASPTKKPKHKSKKRYKDETSDEDSDDDEEIVKESKKNTSTAVLSAEK
FKTIERRKAFFLEKIRPFRYQGGTQVQVMQSYIDYSGAELISQYLASKRSFSQSFDKYLR
KILVILCENTIAIRTKAMKCLTMIVEADPSVLARPDMQIGVNRSFLDQSTAVREAAVDLV
GKFVLSRPDLIDKYYGMLSNRILDTGVSVRKRVIKILKDICIECPEFPKIPEICVKMIRR
VNDEEGIRKLVMEVFQNMWFTPCPNTARPGTLDMTTATADPLTRKVLNITDVVISSRDMG
LEWFQQLLTSLFKPKEDKDDSTKIIYQPPKSLLVSCQQIVDCLIEHLLQLEETSTEGNGS
SQRILACLSTLHLFAKIRPQLLVNHALTLQPYLSLKCQNQYEQQIMSTVASTLELVVPLM
EHPSEVFLAQLEEDAVKLILQRGQLVIASCIACLAAIVNNLTHNYKLIRDVFNQYHSILL
QWKQGWQRNPEVTRSLHSRPHFRRALFIVGLLLRYFDFTDGKVIDGLQSDIKEQVYNTLM
FFVNLEDEDFVSHTLKALGSVCVRHYEFMLRPELKEFYHHLLTSDLAPIEMKADVLRNIE
MYLQEEEQRMIRQDREWSKRSKMENLKEMGDVSSGMASTVIQLYLKEILGSFLHLSTTVR
SSAMKVVQLVLAQGLVHPVQIVPYLICMSTDTEITVSHTADKNLQEIDKKYPGFIHMKAQ
LGIKLSYQLQKILQSDNKGVIRGFRKKEQDDLPSSLNGFLYSLLRNTRPQRRALVLSLLK
QFDDASTAPLDQMLFLADNLSYFPYQVQDEPLFIIHHIDIIISTSGSNLLQLFREGLIKT
NVEEKEPLDEEEDEEEAEALLARVPADARPLRDAMRQARGCLLLLVLKQHLKQLYGLTDA
KINQYSPSENVKVYEKAISRRHAPQFEPKATMAQLQEGDVDDDLDERGRRRLVDDYLEFK
QLMLKFDPEEEEDEEASAAPAAAGGAGAAGAGAGGAGGAGSSKSAPPPAAPPPAT
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagagggatattccaagtgtccctattacaactttggcaggagtagctagttta
actgacttgttacctgtgcttcccctccctacacctttaccatcaacacttaacaataaa
tcccaactttttcatccaagagtggccgaagaagctgcaatattacttgcaactagagat
gataatttagtatcattattgctacaatcacttatgcaaacttcggttcaacatatagac
ttaaaagatgaaactataccaaatgctgtcagtcctgctccacaacaatctactcctgaa
ttgctaaaggcaatcctcaatgtaaatcccaatgtgtttgaccaacagccatcaaatcac
tggggcaatcatttaaatacatcaaaatttaatggaatgtcaccatcacctacttttaat
tatacatcacattctactgtacattcaagcccatcatcccacggcacggctgtccattcg
ggacccatcccaaatcagcaattactagctactccttgccaatcatctccacatgtaaac
attggttctccaccttcacaagcccgaccaggaagtcaagtgaatataactgcccagaat
aacatttccccgccatggaatagtgctaaccagtcgaatacatacacaagccctttggcc
aattcagcaaacccacaaaacggcggattctacaatagtttgctgcaagaaaatagaagt
tttggaactaatattggggaagacaaagatccactgtctatgtcaccaagcaatatacct
gaacagcagcaacttatgcagagtcaggataaagtatttgggcaaggtttgaacaattct
ctagaaggcggtggggtgatgactggtcaatcgccggctcaagctagcgtagcgccatcc
ccactgcggcaggaacctcaagtgcctcaaccttcaatgggcgctccgtacgcgcctcca
ctggccactgcacaagaaaaagaccaatctaaaagtgcaagtgctgtaaatagtagatat
cccgttgtaaaaattggccgactctctgaggggttattgaaaaaacacgaatttactggc
gacgaaagagtgcgaaaaaatagtacagttgaatcggattccgatgataacataccattg
aaggcaaaatcgaaacaaaagcaaaatatttcaaagcctgtagataaagaaagagaggca
atcgacatggctagagaaaaaaattgggaagctgtgaaaaggaaacatgaggaagccagt
aaaaaggaagaagaagaaacatctatagtacgacctaaactacgaaaagttgaaaggaga
ttagtacctgtattagaaatgctatctgtagatgaacttatggaaacaaacacttatcag
agattcaataaactcatagatgctgtttttgaaactattgatgatgatgtgataataaca
gaagaaatggagggtccagatattccagaagaattgttattaccacgttaccaaattcag
gagttatgctcagaagcagcaaagctcaaaaatcttggtgctatggaggccattccagca
gacagattagttcgattattaaatatattggagaaaaatataagagctgctgaaaaaatg
tctttagttggtgatccagatgacagtgaagaaatgcgacagatttggttggaatccgca
ctggaaagagtaatgtgtgcatctgatgcgtgtttaacagctctatatataatgacatcc
ccgagtatgcccaagcgcatatatttagaagatgttattgatagaatagttatgtttata
aagtttcaacttaacaataccatctattgtgtatatgatccagtgtacagtatccagata
acttctaagaaaaaagtggacggtcgcaagcgtcgcggcggcggtgcgtcccacgcgaag
cagcgcagcggcaactcgaaccgtgcggtgcgcgagctgtacacgcacgcgcacgagtgc
gtcacgttgctcggcgaactgttcgcggcgcaccacctcacggatacaacggtgttgcac
gcctctacggttgccgtgtcgccgttcttcgtcgagaatattagcgagctgcaactgtcc
gcgctcaaactggttactacgatattcactaaatacgagcaacaccggcggttgctattg
gaggatatattggcgtcgatagcgcggataccgagttccaaacacaacttgcgatcattc
caactgagctcggaccaacacattcaaatgctcacagcgcttgtgttgcaactcgtccaa
tgtgtcgttacactgccagagactttgtgcaagtcacaagataaggataaagaagtagaa
tcagagagtaaaaagcatgttgacaaggacctcttaataatatccagatatgaggcagct
ataagcgtgggcggaacattcctgacatcatttttaaataagtgccgaagtcgcacggaa
gaagtagattttaggcccctgtttgaaaattttgttcatgatttacttacgacagttaac
aaaccagaatggcccgccaccgaattattactgagtttacttggaacaatgcttgttaaa
tatatgtctgacaaatcgatggaaatgccagttcgcgtggcttcattagagtatttgggt
ttggttgcgtcgcgactcaggcgagacagtgtgcattcgcgcgccaagctgtctactatg
gacgcagttgttagggatattcgcgctgaggaggagaaggatggatcgcagggacatacc
ccttcctctggattagatgaagatgagcaaagaacagaatttttacaaagggttttactc
gattatttagccatcaacggacagaaagatcaagcgtggaattgcgcacgtcatttttat
attactcagtggtacagagatatggttgtacaacctaaagcgtcacctactaaaaagcct
aaacataaatcgaaaaaacggtacaaggatgaaactagtgacgaggactcggacgacgac
gaagaaatcgttaaagaatctaagaagaacacttcaactgctgtactatctgcagaaaaa
tttaaaacgatagaacggcggaaagcttttttcttagaaaaaataagaccatttcgctat
caaggtggaactcaagtgcaagtgatgcaatcatacatagattatagtggggcagagcta
atatctcagtacttagcgtccaagagatctttttcacaaagttttgataaatatttgaga
aagattttagttatattgtgcgagaacacgatagcgattcgaacaaaagcaatgaagtgc
ttgacaatgatagttgaagcggacccatcagttctggcgaggccggacatgcagattggt
gtcaatcgctcctttctcgaccaatcgactgcagtgcgggaggcggccgtggaccttgtc
ggcaagtttgttctcagtcggcctgatcttattgacaagtattacggcatgctttcgaac
agaatattggatacgggtgtttctgtaagaaaaagagtgataaaaatcttaaaagatata
tgtatagaatgtcctgaatttcccaagatacccgaaatatgtgtaaaaatgattagacga
gttaacgatgaggagggtatccggaaattggttatggaagtgtttcaaaacatgtggttt
acgccgtgcccgaacacagcgcgacctggtacactcgatatgacgacagccacagctgat
cctttgacgaggaaagttcttaacatcaccgatgttgttatatcatcgagagatatggga
ttggaatggtttcaacagttattgacaagtttatttaaacctaaagaagacaaggatgat
tcgaccaagataatttaccagccgcctaaatcgttattggtatcgtgtcaacagattgtt
gattgccttattgaacatttattacagttagaagaaactagcactgagggaaatggttca
tcccagcgtattttagcgtgcctttccacattacatttgttcgcaaaaataaggcctcag
ttgctggtcaatcacgcattgacgctgcagccttacttaagcttaaaatgtcagaatcag
tatgaacaacaaataatgtcaaccgtggcatccactttggaactagttgtccctttaatg
gagcatcccagtgaagtgtttctagctcagttagaagaagacgctgttaaactgatattg
cagcgcggccaacttgttatagcatcgtgtatagcctgcctcgctgccattgttaacaat
cttacgcacaattataaacttataagagacgtctttaaccagtatcacagtattttacta
caatggaaacaaggctggcaacgcaatcctgaagtgacgcgatcgctgcactcacgacca
cattttagaagagctttattcattgttggacttttacttagatattttgactttaccgac
ggtaaagtaattgatggattgcagagtgacatcaaggaacaagtgtataacacgctgatg
tttttcgttaatttagaagacgaggattttgtatctcacacattaaaagcactcggttca
gtgtgcgtcaggcattacgaatttatgcttcggcctgagttgaaggagttttatcatcac
cttttaacgtcagatcttgcgcctattgagatgaaagcggatgtgcttagaaatatcgaa
atgtacttacaggaagaggagcaaagaatgataagacaagatagagaatggtcaaaaaga
tcgaaaatggaaaatcttaaggaaatgggtgatgtgtcatctggaatggcatcaactgtg
attcagttatacctcaaagagatcttgggttcgttcctgcacttgagcactacggtgcga
tcgagcgctatgaaggttgtgcagttggtgcttgcgcagggtctagtgcatccagtacag
attgttccatatttaatatgtatgagcacggatacagaaattacggtgtcacatacagct
gataaaaatctgcaagaaattgacaagaaatatcctggcttcattcacatgaaagctcaa
ctaggaattaaactttcctatcaattgcagaaaattttacagtctgataacaaaggagtt
attcgaggattcaggaaaaaagagcaagacgatttaccctcatctttaaatggattttta
tattcattattacggaatacgaggccgcagagaagagcgcttgtattgtcattattaaaa
caattcgacgacgcttcgactgcgccgttggatcagatgctctttttggctgacaacctg
agctactttccatatcaagttcaagatgaacctttgtttatcatacaccatattgatatt
attatttctacgtcgggatccaatttattacagctttttcgtgagggcttaataaaaacg
aacgtggaggagaaggagccgctcgacgaggaggaggacgaggaagaggcggaggcgctg
ctggcgcgcgtgccggccgacgcgcggccgctgcgcgacgccatgcgccaggcgcgcggc
tgcctgctgctgctcgtgctcaagcagcacctcaagcagctgtacgggctcactgacgcg
aaaataaaccagtactccccgtcggagaacgtgaaggtgtacgagaaggcgatatcgcgg
cggcacgcgccgcagttcgagcccaaggcgacgatggcgcagctgcaggagggcgacgtg
gacgacgacctggacgagcggggccggcggcgactcgtcgacgactatctagagtttaag
cagttgatgttgaagtttgacccggaggaagaggaggacgaggaggcgagcgcggcgccg
gcggcggcgggcggtgcgggggcggcgggcgcgggcgcggggggagcggggggcgcgggc
agcagcaagagcgcgccgccgcccgccgcgccgccgcccgccacctag
DBGET
integrated database retrieval system
