Colias croceus (clouded yellow): 123690941
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Entry
123690941 CDS
T08651
Name
(RefSeq) helicase domino
Organism
ccrc
Colias croceus (clouded yellow)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
EP400_N
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
123690941
NCBI-ProteinID:
XP_045491059
LinkDB
All DBs
Position
4:53489..90545
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AA seq
1887 aa
AA seq
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MNGRDDTAPVFSTVPAVLPMGVERSGSGGGGVAGAPGAAAALNGAAPADRADEPPRKRPK
LVLTDDISSLRKRILEYKLLRLKNLRDRYTEQLSELYFLQAGGNMMDYATWRKKPPAPQL
VAFLEARRPPPAIPPPPEPPPAPCTAPPAPPAAPEPEPPAAPPAAPAPAPPAPPAPLAPA
DEMVEKAKQEAYVASRVAELVRSGLWTERRLPRVLEPPRPKTHWDYLLEEMAWLAQDFAH
ERKWKKQAAKKCARAVQKYFQDKAVAAQKAEKAQELQLKKIAAFAAKEIRTFWANVEKLV
EWKRVQRVERARKEALDEQLSYIVDRTERYSRQLAANLHSAGAGDAPDTPPSDDEFQPRG
DSDDDEETIAAAEREAAQSAGDHRDELAALRRESRLALGDLLPPGYVPAHSPPPSDYGPD
GDSADDEATIAEQERAERPDETAAELAALQDEADLDLDELLRRYRARSPRSPPAASAASS
TASEVDGDEDEDDTDSEDDESTGSEHLEALMDGADGGAGGAVGADGGAGGDQEQGSQRVE
AAASLAASLQPTGTTLSETAVGTPVPRLLKHSLREYQHVGLHWLATMHARRLNGILADEM
GLGKTIQTIALLAHLALERRDWGPHLVIAPTSVVLNWEMEFKKWCPAFKILTYYGTIKER
KLKRVGWTKANSFHVCITSYKLVVQDHQSFRRKRWKYLILDEAQNIKNFKSQRWQMLLNF
QTERRLLLTGTPLQNSLLELWSLMHFLMPDVFASHSEFREWFAPVAGIAEGSTRYSEALV
RRLHEVLRPFLLRRLKADVERQMPRKYEHVLMCRLAKRQRFLYDDFMSRAKTKESLASGN
LLSVINVLMQLRKVCNHPDLFEPRPVSSPLQLAPLQCRVPALALVAAVAERVAAAARLGG
DLASLEAAGAEAFAAHRARHLAPPRRLVEELAERPAAAAPRPPPAALRLHLRLVPRAPPA
RAPPPAAPPRLAGGPAPSAPPAAPPARPPAGAAGRLAAHRRGCLRRLAATNERRCWRLPL
FGADLRAALAVPPPALSLVPHKSIEDVLTEMHDVIDRFSVCWAAARAGGVVLAAGGGPGA
RAWRRAAGLLARALGPPARRALALLHAPAARQAVAFPHPRLLQYDCGKLQTLDGLLRRLK
AGGHRVLIFTQMTRVLDVLEAFLSLHGHTYLRLDGATRVDQRQPLVDRFNSDARVFAFIL
STRSGGVGLNLTGADSVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHVFRLVTAATVEENI
LRKAEQKRALGHLAIEDGHFTTSYLRAANIKELFGAEGGAGGAGGEGAGAGGEGGELESA
LAAAEDEADAQAAAAARAEAQGELAEFDESVPLDDEPRAPADRDAPELRALMDQLTPVEK
YAMRMVETSEAATEAERAALGEMRRQLREWERARRELRDRDPPPAKPADRPADPLTYSAD
DARAQVWVCDGDSSERMPVWGPPTPPSSDGDVYCDSWARALYRRGAAPDALLPPVRWRDP
RAARSPRRARPARAAPAPPSLFERAGARPRPRARPPPAAPRDPPAPPPDWAACEDAALRR
ALRLQRLPAEPPAARAPNWEWLAELVNEVARAYRSPRACRDRHDALADPERARRKHRKPP
PARRRPDDEAPRPPTQRLDAMRDAAERRRAAPKRRLDDAAHRNPKHAALLADHGVDYETP
PTPMEVATRRAERIAKEKLKAGGGPATSSAPAAGSAPQRIVVAAHATGAAPPAAPRPELV
RRARPTGGAPAPADTPRSAAPAQPTAQLLYRQQPLAGRHQLRILHHAAPGHPQSVVSSAA
TSISTVEGPSGGGAAALRTLQLQQLALRRARPHPQVVFAHLAPAPAPSPAPPPAAPSPAA
PSSPAPAPSPAPSTAPPGQPATHDTHH
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggcgcgatgataccgcccctgtgttttcgacagttccagctgtattacccatg
ggtgtggagcgcagtgggagcgggggcggcggcgtcgcgggcgcgccgggcgcagccgcc
gctctcaacggcgccgccccggccgaccgggccgacgagccacctcgtaagcggcccaag
ctagtcctcaccgatgatatatcctcacttcgtaaacgaatactcgaatacaagttgctt
cgactaaaaaatttacgggataggtatacagagcagctcagcgagctgtacttcctgcag
gcgggcgggaacatgatggactatgcgacatggcgcaaaaagcctccggcacctcagttg
gttgcgttcctagaggctcggcggccgccaccggccatcccgccgccgccggagccgccc
ccggcgccgtgcaccgcaccgcccgctccgccggccgcgcccgagcccgagccgcccgcg
gcgccccccgcggcgcccgcgcccgcgccccccgcgcctcccgcgcccctcgcgcccgcc
gacgagatggtggagaaggccaagcaggaggcgtacgtggcgtcgcgcgtggcggagctg
gtgcgctcggggctgtggacggagcgccgcctgccgcgcgtgctcgagccgccgcgcccc
aagacccactgggattatctgttagaagagatggcgtggctcgcacaagactttgcacat
gaacgcaagtggaaaaaacaggcagcaaaaaagtgtgctagagcagttcaaaaatatttc
caagacaaagctgtagcagcccaaaaggcagaaaaagcgcaagaattacaactaaaaaaa
atagcagcatttgcagcaaaagaaataagaacattttgggccaatgtggaaaagctcgtt
gaatggaaacgcgtccagagagtggagagagcccggaaagaagcgctcgacgagcaactc
agctacatcgtcgaccgcacggagcgatactcgcggcagctggccgccaacctgcactcg
gcgggggccggcgacgcgcccgacacgccgccctccgacgacgagttccagccgcgcggc
gactcggacgacgacgaggagaccatcgccgccgccgagcgcgaggccgcgcagtcggcg
ggcgatcaccgcgacgagctagccgcgctgcgccgcgagtcgcgcctggcgctcggcgac
ctgctgccgcccggctacgtgcccgcgcactcgccgccgccctccgactacgggcccgac
ggcgactcggccgacgacgaggccaccatcgccgaacaggagcgcgccgagcggcccgac
gagaccgccgccgagctggccgcgctgcaggacgaggccgacctggacctggacgagctg
ctgcgccgctaccgcgcgcgctccccgcgctccccgcccgccgccagtgcagcatcctcc
accgccagcgaggtggacggcgacgaggacgaggacgacaccgactcggaagacgacgag
tcgacgggctccgagcacctggaggcgctgatggacggcgcggacggtggggcgggcggg
gcggtcggcgccgacggcggggcgggcggcgaccaggagcagggctcgcagcgcgtggag
gcggcggcgtcgctggcggcgtcgctgcagcccaccggcaccacgctgtcggagacggcg
gtgggcacgccggtgccgcggctgctgaagcactcgctgcgggagtaccagcacgtgggg
ctgcactggctggccaccatgcacgcgcgccggctcaacggcatcctggcggacgagatg
gggctcggcaagaccatccagacgatcgcgctgctggcgcacctggcgctggagcgccgc
gactggggaccgcacctcgtcatcgcgcccacctccgtggtgctcaactgggagatggag
ttcaagaagtggtgccccgccttcaagattcttacctattacgggacgatcaaagagcga
aagttaaaacgcgtcggttggacgaaagcgaactcttttcacgtgtgcataacctcgtac
aaactagtcgttcaggaccatcaaagttttcgaaggaaacggtggaaatatttaatactc
gatgaggcccagaatatcaaaaactttaaatcccagcggtggcagatgctgctcaatttt
caaacagagaggcgtctgctgctcacgggcacgccgctgcagaacagtctgctggagctg
tggtcgctgatgcacttcctgatgcccgacgtgttcgcgtcgcacagcgagttccgcgag
tggttcgcgcccgtcgccggcatcgccgagggcagcacccgctacagcgaggcgctcgtg
cggcgcctgcacgaggtgctgcggcccttcctgctgcggcgcctcaaggccgacgtggag
cgccagatgccgcgcaagtacgagcacgtgctcatgtgccgcctcgccaagcgccagcgc
ttcctctacgacgacttcatgtcgcgggccaagacgaaagagagtctcgcctccggcaat
ctgttgagcgtgatcaacgtgctgatgcaactgcgaaaagtgtgcaaccacccggacctg
ttcgagccgcggccggtgtcgtcgccgctgcagctcgcgccgctgcagtgccgcgtgccc
gcgctcgcgctcgtggccgccgtcgccgagcgcgtcgccgccgccgcgcgcctcggcggc
gacctcgcctcgctcgaggcggccggcgccgaggcgttcgcggcgcaccgcgcgcgccac
ctggcgccgccgcgccgcctcgtggaggagctcgccgagcggcccgccgccgccgcgccg
cgcccgccgcccgccgcgctgcgcctgcacctgcggctcgtgccgcgcgccccgcccgcg
cgcgcgccgccgcccgccgcgccgccgcgcctggccggcgggccggcgccgagcgccccg
cccgccgcgccgcccgcgcgcccgcccgccggcgcggcgggccggctggcggcgcaccgg
cgcggctgcctgcgccggctggcggccaccaacgagcggcgctgctggcgactgccgctg
ttcggcgcggacctgcgcgccgcgctcgccgtgccgccgcccgcgctctcgctggtgccg
cacaaatctatcgaagacgttctcacggagatgcacgacgttattgaccggttcagcgtg
tgctgggcggcggcgcgcgcgggcggcgtggtgctggcggcgggcggcgggccgggggcg
cgggcctggcggcgggcggcgggcctgctggcccgcgcgctgggccctccggcccgccgc
gcgctggcgctgctgcacgcgcccgccgcgcgccaggccgtcgccttcccgcacccgcgc
ctgctgcagtacgactgtggcaagctgcagacgctggacgggctgctgcggcggctgaag
gcgggcgggcaccgcgtgctgatcttcacgcagatgacgcgcgtgctggacgtgctggag
gcgttcctgtcgctgcacgggcacacgtacctgcggctggacggcgccacgcgcgtggac
cagcgccagccgctcgtggaccgcttcaacagcgacgcgcgcgtgttcgccttcatcctg
tccacgcgcagcggcggcgtcggcctcaacctcacgggcgccgactcggtcgtgttctac
gactcggactggaacccgaccatggacgcgcaggcgcaggaccgctgccaccgcatcggc
cagacgcgcgacgtgcacgtgttccggctcgtcacggccgccaccgtcgaggagaacatc
ctgcgcaaggccgagcagaagcgtgcgctgggccacctggccatcgaggacggccacttc
accacctcctacctgcgggcggcgaacatcaaggagctgttcggcgcggagggcggggcg
ggtggggcgggtggtgagggcgcgggggcgggcggggagggcggcgagctcgagagcgcg
ctggcggcggcggaggacgaggcggacgcgcaggcggcggcggccgcgcgcgccgaggcg
cagggcgagctggccgagttcgacgagagcgtgccgctcgacgacgagccgcgcgcgccc
gccgaccgggacgcgcccgagctgcgcgcgctcatggaccagttgacccccgtggaaaag
tacgcgatgagaatggtggagacgagcgaagcggccacggaggcggagcgagccgcgctc
ggcgagatgcggcgccagctgcgcgagtgggagcgcgcgcgccgcgagctgcgcgaccgc
gacccgccgcccgccaagcccgccgacaggcccgccgacccgctcacgtacagcgcggac
gacgcgcgcgcccaggtgtgggtgtgcgacggagactcgtccgagaggatgccggtgtgg
ggcccgcccacgccgccctccagcgacggcgacgtgtactgcgacagctgggcgcgcgcg
ctgtaccgccgcggcgccgcgcccgacgcgctgctgccgcccgtgcgctggcgcgacccg
cgcgccgcccgctcgccgcgccgcgcccgccccgcgcgcgccgcgcccgccccgccctcg
ctgttcgagcgcgccggcgcgcggccgcggccccgcgcgcgcccgccgcccgccgcgccg
cgcgacccgcccgcgccgccgcccgactgggccgcctgcgaggacgccgcgctgcgccgc
gcgctgcgcctgcagcgcctgcccgccgagccgcccgccgcgcgcgcgcccaactgggag
tggctcgccgagctcgtcaacgaggtggcgcgcgcctaccgctcgccgcgcgcctgccgc
gaccgccacgacgcgctggccgacccggagcgcgcgcgccgcaagcaccgcaagccgccg
ccggcgcgccgccgccccgacgacgaggcgccgcgcccgcccacgcagcgcctggacgcg
atgcgcgacgcggccgagcgccgccgcgccgcgcccaagcgccgcctcgacgacgccgcg
cacaggaaccccaagcacgcggcgctcctggcggaccacggggtcgattacgagactccg
ccgacccccatggaggtggcgacccgacgggccgaaagaatcgccaaagaaaagttgaag
gccggcgggggcccggcgacgtcctcggcgcccgcggcgggctcggcgccgcagcgcatc
gtggtggcggcgcacgcgacgggcgcggcgcccccggcggcgccccggcccgagctggtg
cggcgcgcgcggccgacgggcggcgcccccgcgcccgcggacacgcctcgctctgcggct
cccgcgcagcccacggcgcaactgctgtaccgacagcagccgctcgccggccgacaccag
cttagaatattacatcacgcggctcctggccatccgcagagcgtggtgagcagcgcggcg
acgagcatcagcacagtggaggggccgagcggcggcggcgcggcggcgctgcgcacgctg
cagctgcagcagctggcgctgcgccgcgcgcgcccgcacccgcaggtcgtgttcgcgcac
ctggcgcccgcgcccgcgccctcgccggcgcccccgcccgcggcgccctcgcccgccgcg
ccctcttcgcccgcgccggcgccctcgcctgcgccctccaccgcgccgcccggccagccc
gcgacgcacgatacgcaccactga
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