KEGG   Colias croceus (clouded yellow): 123691185
Entry
123691185         CDS       T08651                                 
Name
(RefSeq) splicing factor 3B subunit 1
  KO
K12828  splicing factor 3B subunit 1
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123691185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccrc03041]
    123691185
   03036 Chromosome and associated proteins [BR:ccrc03036]
    123691185
Spliceosome [BR:ccrc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    123691185
 Complex B
    123691185
 Complex C
   U2 SnRNP specific factors
    123691185
Chromosome and associated proteins [BR:ccrc03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    123691185
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG UTP20_N
Other DBs
NCBI-GeneID: 123691185
NCBI-ProteinID: XP_045491426
LinkDB
Position
4:complement(6990105..6998649)
AA seq 1338 aa
MDKIPRTHEAIEAQIREIQAKKNELPENGSGKGVSLAETYYDSDIYDNSAPGGKSRYDGY
VTSIAANDENEDEDVENVPVTQKRPGYTAPASLLNDIAQSDKDYDPFADKRRPTIADRED
EYRQKRRRMIISPERVDPFAEGGKTPDVGSRTYTEIMKEQYLRAEETELRKKLLERAREG
TLKPVAQSNGEAAKPAAKRKGRWDQSSEETPTVKKPVVAATPSSQATPSWENERGAWEET
PGAGGRGGETPGATPSARVWDATPGHATPGHATPGRETPAHHASRRNRWDETPKTDRETP
GHSSGWAETPRTDRGVGVDTIQETPTPATKRRSRWDETPGATPAAATPTPSHATPSHATP
SHATPSHATPTPHTPVFTPGGSTPVGVKAMAMATPTPGHIAAMTPEQLQAYRWEKEIDER
NRPYTDEELDAMFPPGYKVLPPPAGYVPIRTPARKLTATPTPLAGTPIGFFMQTEEVGGS
AAAAARLLDPQPKGSQQLPFMKPEDAQYFDKLLIDVDEDTLSPEELKERKIMKLLLKIKN
GTPPMCKAALRQITDKARDFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSL
VEIIEHGLVDEQQKVRTITALASAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAF
LKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEPQYI
MDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDDNEQYRK
MVMESIEKILANLGAADIDSKLEEALIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVK
PYLPQICGIILWRMNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
PEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALIHLLNHVWPNIFETSPHL
VQAFMDAVEGMRVALGPIKILQYALQGLFHPARKVRDVYWKIYNTLYIGGQDALVAGYPR
IQNDPNNHFIRYELDYML
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggacaaaataccgagaacacacgaagctattgaggctcagattcgtgaaatacaagca
aagaaaaatgaattgcctgaaaatggatctggcaaaggtgtatcactagctgagacatac
tatgacagtgatatatatgataactcagctccaggtggcaaatccagatatgatggttat
gtgacctcaattgctgccaatgatgaaaatgaggatgaagatgtagagaatgtaccagtt
acccaaaaacggccaggctatactgcccccgcatcattattaaatgatattgcacagagt
gataaggactatgatccatttgctgataaaagacggccaactattgcagatagagaagat
gaataccgtcagaagaggcgtaggatgatcatatctcctgagagagttgaccctttcgct
gagggtggcaagacaccagatgttggatccagaacttatacagaaattatgaaagagcag
tatcttcgagcagaagaaacagaattacgaaagaaacttctagagagggcacgtgagggc
accttaaagccagttgctcaatcaaatggagaagctgctaaaccagctgctaagcgtaaa
gggcgctgggatcaaagctcagaagaaacaccaactgtcaagaaacctgtagttgcagct
acaccaagctctcaagctactccatcatgggaaaatgagagaggcgcctgggaagagaca
ccaggcgcgggtgggcgcggcggcgagacgccgggcgcgacgccctccgcccgcgtgtgg
gacgccacgccgggccacgccacgcccggccacgccacgccgggccgcgagacgcccgcg
caccacgcgtcgcgcaggaaccgctgggacgagacgcccaagactgatagagaaacacct
ggacatagcagcggttgggctgaaacgccgagaacagatcgaggtgttggtgtggacaca
attcaagagactcccacaccagctacaaaacgtcgttctcgttgggatgaaacaccaggc
gctacgccggctgccgctacgcccaccccttctcacgctacgccgtctcacgctacgccg
tcacatgctacgccctctcatgccacgcccacaccgcatacacctgtgtttactccaggc
ggttctaccccagtcggagtcaaagcgatggccatggcgacaccaacaccaggccacatt
gctgcaatgactccagaacaattgcaagcatatcgatgggagaaagaaatagatgaacga
aatcggccctatacagatgaagaactcgatgccatgttcccacctgggtacaaggttttg
ccacctccagccggttacgtcccgatacggacgccggctcgtaagctgaccgccacgcct
accccattggctggtaccccaatcggctttttcatgcagacggaggaagtggggggctcc
gcggcggcggcggctcggctgctggacccgcagcccaagggctcccagcagctgcccttc
atgaaacccgaagacgcgcagtacttcgacaagctgctcattgacgtcgacgaggacacg
ctctcgcccgaggagctcaaggaacgcaagatcatgaagctcctgctcaagataaaaaac
ggaactcctccgatgtgcaaggcggcacttcggcaaattacagacaaagctcgtgacttt
ggcgcaggtccgctttttaaccaaattctaccacttcttatgagtcccacacttgaagat
caagagagacatttacttgtaaaagtcattgatcgtatcctttacaagttagatgattta
gtgagaccctatgtacacaaaattttggtggtcatagagccgcttttgattgatgaagac
tactatgctcgagttgagggacgtgagattatatcgaacttagcaaaagcagctgggctt
gctactatgatttctacaatgagacctgatattgacaacattgatgaatacgtgagaaat
acgacggctagggcgtttgctgttgtcgcatctgcattgggtatcccgtcactcctgccc
ttcttgaaggctgtgtgtagatcaaagaagtcttggcaagctaggcacacaggaataaag
attgtacaacaaattgctattctcatgggctgtgctattttaccacatctcaagtcactg
gtggagattattgaacatggtttagtagatgaacaacagaaagtgagaacaatcacagct
ctggcgagtgccgcgttggcggaagcggcgacgccgtacggtatcgagtccttcgactcc
gtgctcaaacccctgtggaagggtatcaggacgcatcgtggtaaaggtctagctgctttc
ttgaaggccatcggttatctcatcccacttatggacgctgaatacgcgaactattatact
cgagaagtgatgcttatccttatccgtgagttccagtcgcccgatgaggaaatgaagaaa
attgtattaaaggtcgtaaaacaatgttgcggtaccgatggtgtggaaccacaatatatt
atggatgaaattttaccacacttcttcaaacacttttggaatcatcgaatggctctcgac
cgacgtaactatcgccaactggttgatacgactgtagaaattgcgaataaagttggtgca
tcagaaatcattaacaggattgtagatgacttgaaagacgacaatgaacaatacagaaag
atggtgatggagtccattgaaaagattcttgccaaccttggagcagcagatattgactca
aaactcgaagaagctcttattgacggtatactttacgcatttcaagaacagacgactgag
gatgtggtaatgctgaatgggtttggtacaatagtaaatcagttaggaaaacgagtgaag
ccatatctaccacagatctgtggtatcattttgtggagaatgaacaataagtcggcgaag
gtgcggcaacaggccgcggatcttatatccagaattgcagttgtaatgaaaacgtgccag
gaagaaaaattgatgggccatcttggtgtggtgttgtatgaatacctaggagaagagtat
cccgaagtattgggatctatacttggcgcattgaaagctatcgtgaatgttatcggaatg
acaaaaatgacgccacccatcaaagatttacttccgagactgacgcctatattaaaaaat
aggcatgaaaaggtacaagagaactgcattgatctagtcggtcgtatcgccgatagagga
ccggaattcgtttccgctagagaatggatgaggatatgttttgagcttctggaattgttg
aaagcgcacaagaaagcgatcagacgagcgacggtgaacacattcggttatatcgctaag
gctatcggtccgcatgacgttttggcaactttactcaacaatttgaaagttcaggagaga
cagaatagggtgtgtacaacagtcgccatcgctattgtagcggaaacatgttcaccgttc
acagtattgccagctttaatgaatgagtacagagtaccagagttgaatgtacaaaatggt
gtgctcaagtcgttgtccttcttgtttgaatacattggggagatgggaaaagattacatt
tatgctgtatgcccactgttggaggacgctttaatggacagagatcttgtccatcgtcaa
acagcctgtgctgcgattaagcacatggcgctgggagtgtacgggtttggttgcgaagac
gctctcatacatttgctgaatcacgtgtggccgaatatctttgagacgtcgccacatctt
gtacaagccttcatggacgcggttgaaggcatgcgagtcgctttgggccctattaagata
ctgcaatatgcgctacagggtttgttccatccggcaaggaaagtccgcgatgtgtactgg
aagatttacaacaccttgtatattggtggtcaagatgcccttgtagctggatatccgcga
atacaaaacgatccaaataatcattttattcgttatgaattagattatatgttgtaa

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