Colias croceus (clouded yellow): 123691498
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Entry
123691498 CDS
T08651
Name
(RefSeq) very low-density lipoprotein receptor-like isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccrc04131
]
123691498
Membrane trafficking [BR:
ccrc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
123691498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
DUF5050
Vgb_lyase
SGL
Motif
Other DBs
NCBI-GeneID:
123691498
NCBI-ProteinID:
XP_045491877
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All DBs
Position
1:9175243..9349492
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AA seq
909 aa
AA seq
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MFFLVGCRRAAPKYCSNMWWCIFICVMYINVFGVSGSNTTGAVTTNVCSLKQFQCKNGKC
IPMSWICEGEDDCGDNSDEIIEECKKESRTCTASEFRCKTGRCIPMSWRCDNEKDCSDGS
DEEPGTCKVEVCGPEEFTCRGGQGECVPLTWMCDDNLDCTDGSDEKACNETCRSDEFTCG
NGKCIQQRWVCDGDDDCGDGTDEVKCPAPTCQPISHFSCTDGHCISARWRCDGDIDCPDG
SDEMGCATTPKVTSPCIATEFECRDRMTCVHKAWVCDGDRDCPDGGDEAPEICRGNITCR
LDQFQCKDHSCIPGALYCNGDKDCPDGSDEINCTKPKPVCDKKTEFDCGEGMCIPLSKLC
DGKPDCPNFEDEPRDRCGEDECAKNNGGCTQRCVNTPVGYYCDCDKGYKLVDNQTCEDID
ECMDPGACSQMCINEKGTFKCECHAGYARDPRDRTRCKATEGHPSLLFARRFDIRKISLD
HHEMVAIVNDTKSATALDYVFRTGMIFWSDVTDEKIYKAPIDEGSQRTVVIGDQLITSDG
LAVDWIYNHLYWTDTGKNHIELSDLQGNMRKILIRDRLEEPRAIALNPLDGWMYWTDWGQ
TPKIERAGMDGSHRQTIVSYDVKWPNGLTLDLVRKRVYWVDAKLNTISSCNYDGSARRVI
LYSTDVLRHPFSITTFEDWVYWTDWDKTAVYRANKFNGKDVEAITSTHTLQNPMVIHVYH
PYRQPDGVNHCAAVNGHCSHLCLPAPRIGAHSPRVSCACPTGLRLMPDNQMCVEDNAIKP
DVEVQNSSSGLEKTKIIEEKPISSVPETPKTGTGISTSGRDAGVVAGIVVAVISGIIVIA
ALIAVVMYRHYVHRNVTSMNFDNPVYRKTTENQFALEQNGYAPGSKLYPSTVGEEAQEPL
NTPGTNEFV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgttctttttggtgggctgtcgacgggcagcccccaaatattgttccaatatgtggtgg
tgtatatttatttgtgtcatgtacattaatgtttttggagtatcaggctcaaatacaact
ggagctgtaacaacgaatgtgtgttcgctgaaacagtttcagtgtaagaacgggaagtgc
ataccgatgtcgtggatctgcgagggagaagacgactgtggcgacaattccgatgaaatc
attgaagaatgcaaaaaagaaagccgtacgtgcacagcgtcagagttcagatgcaagaca
gggcgctgtataccgatgtcatggcggtgtgacaacgaaaaggactgttctgatggctct
gatgaagaaccaggaacctgcaaagtggaggtatgcggtcccgaagaattcacttgcaga
ggtggccaaggagaatgcgttccactcacgtggatgtgcgatgacaacctcgactgtacc
gatggttcagatgagaaagcatgcaatgagacttgtcgctcggatgaattcacttgcggc
aatggcaaatgcatacaacaacgatgggtgtgcgacggtgacgacgactgcggcgatggt
acggacgaggtgaagtgccctgcgcccacctgccaacccatcagccacttctcctgtact
gacggtcattgtatctccgcaagatggcgatgcgatggagacatcgactgccctgatgga
agcgacgaaatgggatgtgcaacgactcccaaagtgacgtcaccgtgcatagccaccgag
ttcgaatgtagagatcgcatgacttgcgtccacaaggcgtgggtgtgtgatggtgatcga
gactgtcccgatggtggtgatgaagccccagagatatgtagaggaaacatcacgtgtaga
cttgaccaattccagtgtaaggaccatagctgcatccctggtgccctgtactgcaacggt
gataaggattgcccagatggcagcgatgaaattaactgcacgaaaccaaaaccggtttgt
gacaagaagactgagttcgattgcggggaaggcatgtgtataccgctgtcgaagctttgc
gacggtaaaccagactgtccaaacttcgaagacgaacctagagacaggtgcggggaagac
gaatgcgctaagaataatggaggctgtactcagcgttgtgttaacacaccagtaggatat
tactgcgactgtgacaagggatacaaactcgtggacaatcagacttgtgaagacatagac
gagtgcatggacccgggcgcgtgttcccagatgtgtataaacgagaagggtaccttcaag
tgcgagtgtcacgcaggatacgcaagggaccctcgtgatagaactcgctgtaaggcaaca
gagggacacccgtcactactgttcgctagacgctttgatataagaaagatcagcttggac
caccacgaaatggtcgccatagtgaatgacacgaagtccgccacggcactagattacgtg
tttcggacgggcatgatattctggagtgacgtcacggatgagaagatttacaaagcgccc
atagacgaaggaagccaaagaacagtggtaatcggcgaccagttaatcacctcagatggt
ttagcagttgactggatatacaaccatctatactggacggacacgggcaaaaaccacata
gaattgtccgacttgcaagggaacatgaggaagattctcatcagagatcgcttggaggaa
ccgagggctattgcactcaatcctctcgatggttggatgtactggaccgactggggccaa
accccaaagatcgagagagctggcatggacggctcgcacagacagaccatagtgtcgtat
gacgtcaagtggccaaatggactcacgctcgacttggttcgcaaacgagtgtactgggtg
gatgcaaagctgaacactatttcatcatgtaactacgacggatcagcgcgtagagttatc
ctgtactcgacggatgtgcttcgtcatccattctctataactaccttcgaggactgggtg
tactggaccgactgggacaagacagctgtgtaccgcgctaacaagttcaacgggaaggac
gtggaagctatcacttctacgcatacgctccaaaacccgatggtgatccacgtgtaccac
ccgtaccggcagccggacggtgtgaaccactgcgcggcggtgaacgggcactgctcgcac
ctgtgcctgccggcgcccaggatcggcgcgcactcgccgcgcgtgtcgtgcgcctgcccc
accgggctgcggctcatgccggacaaccagatgtgcgtcgaggacaatgcaataaaacca
gatgtggaggtgcaaaattcgtctagtggtttagaaaaaactaaaataattgaggaaaaa
cctatatccagtgtgccagagacacctaaaactggtacaggaatctcaacgagcggccga
gacgcgggcgtggtcgctggcattgtagtagctgttatctctggaattattgttattgct
gctttgattgctgttgttatgtacagacattacgtacatcgtaatgtcacctcaatgaac
ttcgacaaccccgtataccgcaaaacaacggagaaccagttcgcattggagcagaatgga
tatgcacctggaagcaagctataccccagcacggtgggcgaagaggcccaagaaccgctc
aacacccccggcacaaatgagtttgtatag
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