Colias croceus (clouded yellow): 123691846
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Entry
123691846 CDS
T08651
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123691846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123691846
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123691846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
123691846
NCBI-ProteinID:
XP_045492385
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All DBs
Position
5:6150133..6151547
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AA seq
281 aa
AA seq
DB search
MTDIYKLIHPNKYFDDYISRNVRPDGRKFDEQRSIKLNLYAIKTSEASAVVKCGNTTVIC
GITLELATPKAEEPDNGFLVTNVELLPLCSSKFRPGPPSDHAQVVSNTVNDILINSKCID
LKDLCIVSDKLAWVLYCDMVCLDNDGSVVDACLTTLMASLKTLSLPTVNYDVETEDIKVD
PSIRKPLKVTGLPVATSFAIYQTPQSNIVLTDPTAYEEEMCGGIGANLIVCWNQGLLCGV
QKFGGGNITTEKHKDMLKVAKERSKIIEKVIDTCLNDDSNK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgactgatatatataagttaattcatccaaataaatattttgatgattacatttcacga
aatgtacggcctgatggcaggaaattcgatgaacagcggagtattaaattaaatttatat
gcaataaaaacatcagaagcttcagcagttgtcaaatgtggtaatacaacagtgatatgt
ggaataaccttagaattagcaacacctaaagcagaggaaccagacaatggtttccttgtt
acaaatgtagagttactgcctctatgctcatcaaaatttagacctgggccgccatctgat
catgcacaagttgttagcaatacagttaatgacatattaataaattcaaaatgtatagat
ctgaaggacttatgcatagtatctgataaattagcttgggtgctatattgtgatatggtt
tgcttagacaatgatggtagcgttgttgatgcttgtttaactacattaatggcaagttta
aagacattatccttgccaactgtaaactatgacgttgaaacagaggatatcaaagttgac
cccagtataagaaaacctctcaaagttactggactaccagtggctacaagttttgcgata
tatcaaacaccacagagcaatattgtattgacagaccccacagcatatgaagaagaaatg
tgtggtggcataggagcaaatcttatagtatgttggaaccaagggctgctatgtggagtt
cagaagtttggtgggggaaatattacaacagagaagcataaagatatgttaaaagtagct
aaggaaagaagtaagattatagaaaaagttatagacacatgtttaaatgatgattctaat
aaataa
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