Colias croceus (clouded yellow): 123692607
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Entry
123692607 CDS
T08651
Name
(RefSeq) polyadenylate-binding protein 1-A
KO
K13126
polyadenylate-binding protein
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03015
mRNA surveillance pathway
ccrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123692607
09123 Folding, sorting and degradation
03018 RNA degradation
123692607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123692607
03041 Spliceosome [BR:
ccrc03041
]
123692607
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
123692607
mRNA cycle factors
Stress granule specific factors
123692607
Spliceosome [BR:
ccrc03041
]
Complex C
Other components
Complex C specific factors
123692607
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_occluded
RRM_ACIN1
RRM_3
RRM_RdRP1_2
POP1_C
Motif
Other DBs
NCBI-GeneID:
123692607
NCBI-ProteinID:
XP_045493327
LinkDB
All DBs
Position
1:7664821..7668010
Genome browser
AA seq
609 aa
AA seq
DB search
MNPGPPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS
AFGNILSCKVAQDENGGSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKER
EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGSSRGFGFVAFE
DPDAAERACMDLNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYV
KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGGYFVPTIPPAQRFY
GPAQMTQMRPTTRWTQPPVRPSTQTAASAYPNMQAPFRPAPRGPTQTTLRTSLGARPITG
QQGVPAATSIRAPIVTSGRPAGYKYTSNMRNPPAPQPAVHIQGQEPLTATMLAAAPLQEQ
KQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAHQ
AKQQATKKE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgggccacctaattatccaatggcatcattgtatgtcggagatttgcactcg
gatattaccgaggccatgttgtttgaaaaattttctaccgcgggtccagtactctctatt
cgtgtctgccgcgacatgataactcgtaggtcacttggttacgcttacgtaaatttccag
caacctgctgatgctgagagagctttggacaccatgaattttgatatgattaagggaaga
cctattagaataatgtggtctcagcgtgatccctccctaaggaagtctggtgtaggaaat
gtttttattaagaaccttgataagtctatagataataaagcaatgtatgacaccttttct
gcctttggtaatatactgagttgtaaagtagcccaagatgaaaatgggggttctaaagga
tatggttttgtacactttgaaactgaagaagctgccaataagtccattgaaaaagtaaat
ggaatgttgttgaatggaaagaaagtttatgtgggcagattcattcctcgtaaggaacgc
gaaaaggaactgggagagaaggctaaactatttaccaatgtctacgtaaagaactttgga
gaagacttctccgatgaaatgctgaaagacatgtttgagaaatatgggcgtattacaagt
cataaagtaatgtataaagatgatggttcttctagaggttttggatttgttgcttttgaa
gatccggatgctgctgaaagggcttgcatggatcttaatggaaaagaattggtagaagga
aaacccttatatgtaggacgagctcaaaagaaagctgagcgtcaaaaagaacttaagcgg
aaatttgaacagctaaagtctgaaaggttgactcgttaccaaggtgttaacctgtatgtt
aaaaatttggacgacacaattgatgatgagcggcttcgtaaggaatttgcaccattcgga
actataacatcagctaaggtaatgcttgaggatgggcgtagcaaaggctttgggtttgtt
tgcttttcgtctcctgaagaagctactaaagctgtaacagaaatgaatgggcgtatcgtt
ggaaccaaaccactttatgtagctttagctcaacgtaaagaagatcgtaaggcccacttg
acatcacagtacatgcaacgtatggccagcatgagaatgcagcagatgggtcaaatattc
caaccaggaagtgctggaggctactttgtacccaccataccaccagctcaacgattctat
ggtccagcccagatgactcaaatgagacccacaacccgctggacacaaccacctgtaagg
cccagcactcagacggctgcctctgcataccccaacatgcaagctccattccgccctgca
cctcgtggaccaactcaaactactcttcgcacatccttgggtgctagacccattactggc
caacaaggtgtgccagctgctacttcgattcgtgcacctattgtaacaagtggacgccca
gcaggttataagtacacttccaacatgcgtaatccaccagctccgcaacctgcagtgcac
atccaaggtcaagaaccactaactgctaccatgttagctgctgcacctcttcaagagcaa
aaacaaatgcttggtgaacgtcttttccccttgattcaaagaatgcacccagacttagct
ggcaaaattactggtatgcttctagaaattgacaattctgaactgctccacatgttagaa
catggagagtccctgaaggctaaggtggacgaggctgttgctgttttgcaagctcaccaa
gctaaacagcaagccacaaagaaggagtaa
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