Colias croceus (clouded yellow): 123692860
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Entry
123692860 CDS
T08651
Name
(RefSeq) general transcription factor IIE subunit 1 isoform X1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123692860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123692860
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
123692860
Prokaryotic type
Archaeal type
TFE
123692860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE-A_C
TFIIE_alpha
Zn_Ribbon_TF
Zf-C2H2_ZNF451_C
Cas12f1-like_TNB
zf-C2H2_4
zf-H2C2_2
Zn_ribbon_4
Motif
Other DBs
NCBI-GeneID:
123692860
NCBI-ProteinID:
XP_045493615
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Position
6:complement(6025793..6038097)
Genome browser
AA seq
420 aa
AA seq
DB search
MTEERYVTEVPSSLKQLARLVVRGFYTIEDALIVDMLVRNPCMKEDDICELLKFERKMLR
ARIATLKNDKFIQVRLKMETGPDGKAQKVNYYFINYKTFVNVVKYKLDLMRKRMETEERD
ATSRASFKCPSCSKTFTDLEADQLYDMMTQEFRCTFCNQVVEEDQSALPKKDSRLLLAKF
NEQLETLYILLREVEGIKLAPEILEPEPVDINTIRGLTNKHLNRPGGEQWSGEATRNQGL
AVEETRVDITIGDTDNAVDATTLRKERPVWMVESTIAANDQSDSVHSTDMALEKAASTAS
NAKTTGKEKTDDIMSVLLAHEKQNPANNAANSLKGTEQDSGSDSSDNESKDPYKLKDELA
AVAEMESEDSESDDNVPTVLVNGKPVALTSIDDDVIATMSPSEKETYIQVYQEYYSHMYD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagcggtatgtcaccgaagttcctagtagcttgaagcagttagcccgactc
gtagttagaggattttacacaattgaagatgccctaatagtggacatgttggtcagaaat
ccatgtatgaaagaagacgatatttgtgaactattgaaatttgaacgcaaaatgttgagg
gctagaatagccacgttaaaaaatgacaaatttattcaagttagattaaaaatggagacg
ggacctgatggcaaggcacaaaaagtgaattattattttattaactacaaaacattcgta
aacgtcgtcaaatataaactagatctaatgcgcaaacgcatggagaccgaagaacgtgac
gcgacgagtcgcgccagtttcaagtgtccgtcttgcagtaagacttttactgatcttgag
gcagaccagttatatgatatgatgacgcaagaatttagatgtacgttctgcaaccaagtt
gtagaggaagatcaatcggctctcccaaagaaagactcccgactgttgcttgctaaattc
aacgaacaattggaaaccctatacattctcctgcgagaagttgagggtattaagttagct
ccagagatattggaaccagagccagtagatatcaacactattcgaggactgacaaacaag
cacctcaaccgtccgggcggcgagcaatggtccggtgaagcgacccgcaaccaagggctc
gcggtcgaagagacgcgagtggacatcactatcggggacacggataacgcggtggatgcc
accacgctgcgcaaggagcgccccgtgtggatggtggagagcactatcgccgctaacgac
cagagtgatagtgtgcattcaacggatatggctttggagaaagctgcgagtactgctagc
aacgcgaagactaccggcaaagagaaaactgatgacatcatgtctgttctccttgctcat
gagaaacaaaacccagcaaataacgcagcaaattctctcaaaggcacggaacaagacagc
ggttccgattcaagcgacaacgagtcaaaggatccatataaacttaaagatgagctggct
gctgttgccgaaatggaaagcgaagattcagaatcggatgacaatgtaccaacagtgctg
gtgaatggcaagccagtagcgctaactagtatagacgatgacgtcatcgcgactatgagt
ccttcagagaaagagacgtacatccaagtgtatcaagaatactacagtcatatgtatgat
tag
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