Colias croceus (clouded yellow): 123692893
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Entry
123692893 CDS
T08651
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123692893
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Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
PDZ_2
RA_2
Motif
Other DBs
NCBI-GeneID:
123692893
NCBI-ProteinID:
XP_045493698
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Position
6:8476433..8554514
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AA seq
1956 aa
AA seq
DB search
MDAADKRMLDREALRNMIQQWNANRLDLFELSEPNENLEFHGVMRFYFQDSGQKIATKCI
RVASDATVSDVIETLIEKFRPDMRMLSLGSYSLWETHGPDDERKLEPHEKPLLVQLNWHA
DDREGRFLLKCCSGNEMPLSAVNEKGDQNFKRKLSKREKKELKKKEKLSRLKSDTNDENR
PVAEKLYTELPETSFTRSISNPEAVMRRRRQQKLERKLQQFRSKDGGPDTGGTLKIYGSS
LCPSVPYKTLLLSVGDCAAAIVREMLDKYGLSRHDPHHYCIVQVDAADNSEYILEDDECP
LAIVMTHPHRSSIMFHVRRRPSDAQPRRRKKKAGSNASSSARPGNEPMLIEVTPDGTALE
NGRRVRITDVVEVGSGNGTALQLYGPSIQPRHCVVAGAEGGGYTVTPLHTDAHVYVNGRR
TMHTARLQHGCLLKFGRVSTFRFVDPAQENLINRNLSQSQHYGSGSIYDRSGADSGAMSP
ASLAEHGAEPNANANANTNANEAEFPRAASPGSHDTYAYEHQPYNNNTLKLDNESLVASD
SKDEYVRDEHSNVYAEQDQSRTHSQYKDNYETTFDLDGNVETKSICSAKSGGSGHENRSS
GSWRPGQEAILPAVLEFPEAGQAQFLAAVITRLDPHAPAFKLAPVYTLYLCARYRASTHY
RPELTPTERAHKLTAFLHHVATLIHATVQERCTDSAAQAFWMANASELLHFLKCDRHISS
FSTQAQELLPTTVQNAFSNLVSCFAEELRGAVGEMARGGGALADGTEATAPVLQALAAAM
VLLRRCRVNAALTIQLFSHLFHFINAIAFNKLVTEPSNVSARWGAALSARLALLAAWAER
QGLELAADCHLARTHQAARLIQGEYRTAEEVRAALAACFKLNSVQVRALLAPLLPPELLD
AAVQHARALADELYRADGREIRLEENEWLGAALLIPGDGFSAEVVRGVPPGLAEFVAPLQ
RGGLCRLAHQPHAAGLWTVYMHAYGAPPRRAPDPRPQIIQLHKNTSGMGLSIVAAKGAGQ
SKLGIYIKSVVAGGAAAADGRLAAGDQLLSVDGHSLVGISQEKAAEYLVRTGPTVTLEVA
KQGAVLHGLATLLHQPTYSQNRQGGSAGGSVAGVGVAGARRASERDLPARLAAEPVKPSK
STPALHHAPAAAPAHQAHAHANVSGPLSPGAQSVASNSWANKSRSSHNLSTPHGDSFYQN
LSSVHDKQDSRWSSLRSSGSGRPQSAHFNSTEPSNEPSPAQQHQVNQANARAAKLAEMSE
EVNRRQQLQHQHLQQHQHMQYQKPVMPQMYVHTGYGQGPQGLYGSSPQGLQNTPGSMQGL
QNVQGSMHGLQNVQGSMQGLQNVQGSMQNVQGSMQALQNSQGSMHGLQNAQGSVHGMQTS
QSMHGLQNVQGSMHGLQNTQGSMQGLLNVQGSMQGLQAMSPQNQQPSPQLHGSQYLHSQH
QSPHYHNQHGQQQPQRYEWHQPGPPSPQRSQPPVAPKPHGRRPETEVDEMPHQHGASSVQ
PDDERYVASALDPPAVSVYPAAPAGGAGRGLAPHNPWQREERERQAEARRAAARARRDAA
IAQLLALGASRTPVQNQQLRALQLERDFERRATQDEQDEAGTGEGSPEEESIQPELLDHE
RDLRSSHGPHVATQPQPQPHMHQQQHVHTQQQHVHSQQQHVHSQQQHVHPQQQHVHPQQQ
HVHSQQQHVHSQQQSQSQPQPKSILKTNTRTEIVNGYSTHVSTTEETRISDLSTSVSNLS
MSVSSTTNNTSSGEPLPPAPPERGSSFAVMAGRRAMSPHTQHAHQQLPHDNVAPQSPVSA
TRDKRVSFHERAAEAAEATSPGQSPGSSPPPGPAAPPAPPASSPPPLDTPVQREDPDRFI
EEAESMMSGPNMTSTTSPLNTHTPGVIGAQEVYRDPVARRLAAARARAAPAPVPEQLSFK
EKMKMFALESGEASTPKDKVHAVKISRAQRDIDAVH
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcggacaagcgaatgttggatcgcgaggcgctccgcaacatgatccaacag
tggaacgccaaccgcctcgatctgtttgagctcagcgaaccgaatgagaacctcgaattc
catggtgttatgcgattctactttcaagattcgggtcaaaagatagcaacgaaatgcatt
cgtgtagcgtccgatgctaccgtcagcgatgttatagaaacactcatagagaaattccgt
ccagacatgcgtatgttatcgctcggttcgtactccctatgggagacacacgggccagat
gacgagaggaagctggagccgcacgagaagccactgctggtgcaactcaactggcacgcg
gacgatcgtgaagggcgcttcttgcttaagtgctgtagtgggaatgagatgcctttatct
gctgtgaacgagaaaggggaccaaaattttaagcgaaaactttctaaacgggaaaagaaa
gaactgaagaaaaaagaaaaattatcgagactgaaatccgacacaaacgatgaaaaccgt
ccagtagctgagaaattatatacagaattaccggaaacgtcatttacacgaagcatcagc
aacccggaggctgtgatgcgccggcgcagacaacagaaactcgagaggaagttgcagcaa
tttcgctctaaggacggcggaccggatactggtggcacgctaaaaatctacgggtcttca
ctttgcccatcagttccatacaagacgctattactctcagtgggcgactgcgccgcggcg
atcgtacgcgagatgctcgacaagtacggactttcgagacacgacccgcaccactattgt
attgtgcaggtggacgcagccgacaactcggagtacatactggaggacgacgagtgcccg
ctcgcgatcgtcatgacgcacccgcaccgcagttctataatgttccacgtgcggcggcgg
ccgtcggacgcccagccgcggcgcaggaagaagaaagccggctcgaacgcgagctcgagc
gcgcggcccggcaacgagcccatgctcatagaggtgacgcccgacggcaccgcgctagag
aacgggagacgggtccgcatcactgatgttgtggaggtgggctccggcaacggcacagca
ctccagctgtacgggccgtctattcagccgcggcactgcgtggtggcgggcgcggagggc
ggcggctacacggtgactccgctacatacggatgcgcacgtttacgtaaacggccgcagg
actatgcacactgcgagattgcagcacgggtgtctgctgaaattcggacgcgtatccacg
ttccgcttcgtggaccccgctcaagagaacctcatcaaccgaaacctctcccagtcgcaa
cactacggctccggctcgatatacgacaggtcgggcgcggacagcggcgccatgtcgccc
gcttcgctcgcggagcacggcgcggagccgaacgcgaacgcgaacgcgaacacgaacgcg
aacgaggcggagttcccgcgcgcggccagccccggctcgcacgacacgtacgcgtacgag
caccagccgtacaacaacaacacgctcaagctcgacaacgagtcgctcgtggcgtccgac
tcgaaggacgagtacgtgcgcgacgagcactcgaacgtgtacgcggagcaggaccagtcg
cgcacgcactcgcagtacaaggacaactatgagacgaccttcgatctagatggcaatgtc
gaaaccaagagtatatgcagcgcgaaaagtggcggctcaggacacgagaacaggagcagt
ggcagctggcggccgggccaagaggcgatactccccgctgtactggagttcccagaagcg
gggcaggcgcagttcctcgctgcggtcatcacacgcctggacccacacgcaccagccttc
aaactggcgcccgtttataccctttacttgtgcgcaagatatcgcgcttcgactcactat
cggcccgagttgacgccgaccgagagagctcacaaattgacagctttcctacatcacgtc
gcaacgctcatacacgccaccgttcaggaacgatgcactgattccgccgctcaagcgttt
tggatggcgaacgctagtgaacttttacactttctgaaatgtgaccgacacatatcttcg
ttttcaactcaagcacaggagttgttgcctacaactgtacaaaatgcattcagcaaccta
gtgtcctgtttcgcggaggagctgcgcggcgctgtgggtgagatggcccgcggcgggggc
gcgctggcggacggcacggaggccaccgcgcccgtgctgcaggcgctggccgcggctatg
gtgctgctgcggaggtgcagggtgaacgcggcgctcactatacagctgttctcgcatctg
ttccattttatcaacgctattgcgtttaataagctggtgacggagccgagcaacgtgagc
gcgcggtggggcgcggcgctgtcggcgcggctggcgctgctcgccgcgtgggccgagcgg
caggggctcgagctggcggctgactgccacctcgcgcgcacgcaccaagccgcgcgtctg
atccaaggcgagtaccgcaccgcggaggaggtccgcgcggcgctggcggcgtgcttcaag
ttgaactcggtgcaggtgcgcgcgctgctcgcgccgctgctgccgcccgagctgctcgac
gcggccgtgcagcatgcgcgtgcgctcgctgacgagctgtaccgcgccgacggccgggag
atacgattggaagagaatgaatggttgggcgcagcgctactaatccctggcgatggattc
agcgctgaagtcgttcgaggagttccaccaggtctagcggagttcgtggcgcccctgcag
cgcggcgggctgtgccggctggcgcaccagccgcacgcggcggggctgtggacggtgtac
atgcacgcgtacggcgcgccgccgcgccgcgcgcccgacccgcgcccgcagatcatacag
ctgcacaagaacaccagcggcatggggctcagcatcgtcgccgctaagggtgcagggcag
agcaagctgggcatctacatcaagtcggtggtagcgggcggtgcggcggcggccgacggg
cggctcgcggccggagaccagctgctgtcggtggacggacactcgctagttggcatctcg
caggaaaaggcggcagagtacctagtgaggacaggaccgacagttactttggaagtagcg
aagcaaggggctgttttgcatggtcttgcaacgttattgcatcaaccaacgtacagtcaa
aacagacaaggtgggagtgcgggtgggtctgttgcgggtgttggcgtggcgggcgcgcgg
cgcgcgtcggagcgcgacctgcccgcgcggctggcggccgagccggtgaagcccagcaag
agcacgcccgcgctgcaccacgcgcccgcagccgcgcctgcacaccaggcgcacgcgcac
gccaacgtctctggcccgttaagcccgggtgctcaatcggtggcaagcaactcgtgggcc
aacaaatcccgcagcagccacaacctgtccacaccgcatggcgattctttctaccagaat
ctatcgtcggtacacgacaaacaagacagcagatggtcatctctccgctcctcgggtagt
ggacggccccagtccgctcactttaactccacggaaccatccaacgaaccaagtcccgct
caacaacatcaggttaatcaagcgaacgcgagggccgcaaaacttgcagaaatgtccgaa
gaagtaaacagaagacaacaacttcaacatcaacatttacaacaacatcaacacatgcaa
taccaaaagcccgtaatgccgcagatgtacgtgcacacagggtacggacagggcccacaa
gggttgtatggatcttcgccacaagggttgcaaaatacccctggatcaatgcaagggttg
caaaacgtgcaaggttcgatgcatggcttgcaaaatgtacaaggctcaatgcaggggcta
cagaacgttcaaggatccatgcaaaacgtgcagggatcaatgcaagctttacaaaactcg
cagggctcaatgcacggattgcaaaatgcgcaaggctcagtacacggaatgcagacttcc
cagtcgatgcatggattgcaaaatgttcaaggttcgatgcacgggctgcaaaacactcaa
ggctcgatgcagggcttgttaaacgtgcaaggttcgatgcaagggctacaagctatgagt
cctcagaaccaacaaccgtcaccgcaactacacggctcgcagtacttacactcgcaacac
cagagcccgcactatcacaatcaacacggtcaacaacagcctcaacgctacgagtggcac
cagcctggcccgccatcaccacaacggtcccaaccaccagtggctcccaaaccgcacggc
cgcagacccgaaacggaagtcgacgagatgccgcaccagcatggcgccagttctgtgcaa
ccggatgatgagcggtacgtagcgagtgcactagacccgccagctgtatcagtgtacccg
gcggcaccagcgggcggggcgggccgcgggctggcgccgcacaacccctggcagcgggag
gagcgcgagcggcaggctgaggcgaggcgggctgcggcacgggcacgcagagatgcagct
atagcacaattgctagcgctaggagcatcgcgaacaccagtacaaaaccaacaactacgc
gctttgcaactcgagagagacttcgaaagacgtgccacacaagatgaacaggacgaagcc
ggtactggtgaaggcagccccgaagaggaatcaatacaaccagagctattagatcacgag
agagacctacgatcatcacacgggccgcacgtagcaacgcagccgcagccacaaccacac
atgcatcaacaacaacacgtacatacgcaacagcaacacgtacattcgcaacagcaacac
gtacattcgcaacagcaacacgttcatccgcaacagcaacacgtacatccgcaacagcaa
cacgtacattcgcaacagcaacatgtacattcacaacagcagtcgcaatcgcagccgcaa
cctaagtcgatattgaagacgaacacgcgaaccgaaattgtcaacggatattcaacgcat
gttagcacaacagaagagacgaggatatccgatctctcgacaagcgtgtccaacctctcg
atgtccgtatcgagcacgacgaacaacacgagtagcggggagccgctaccgcccgctccg
ccggaacgtgggtcgtccttcgcggtgatggcgggccgccgcgcgatgtcgccgcacaca
cagcacgcgcaccagcagctcccacatgacaatgtggcgccgcaatcaccagtgagtgcg
acccgtgacaagcgcgtgtccttccacgagcgggccgcagaagcagccgaagcaacctcc
cccggacaatctccaggctcgtccccccctcccgggccagcagcaccccccgccccgccc
gcctcctcaccgccaccgctagacacgcccgtgcagagggaggaccccgaccgtttcata
gaggaagcggagagcatgatgtcgggccccaacatgacgtccaccacgtcgccactcaac
actcacacgcccggcgtcatcggcgcgcaggaggtctacagagacccagtagcgcgtcgc
ctagccgcagcccgggcccgcgcggccccagctccagtcccagagcaactatcgttcaag
gagaagatgaagatgttcgcgctcgagtcgggcgaggcgtccacgcccaaggataaggta
cacgctgtgaagatatcgcgcgcccaaagagacatcgacgcggtacactga
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