KEGG   Colias croceus (clouded yellow): 123693026
Entry
123693026         CDS       T08651                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123693026
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccrc03041]
    123693026
Spliceosome [BR:ccrc03041]
 Complex C
  Other components
   Step II factors
    123693026
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EIPR1 WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_NOL10_N PQQ_2 Beta-prop_NWD2_C PEP5_VPS11_N WD_LRWD1 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 123693026
NCBI-ProteinID: XP_045493848
LinkDB
Position
7:10600011..10645692
AA seq 577 aa
MLNIQNYGSSSEDEENDSETIQQHSNEKLLTHLKPVDPNLSIAKKMQVCAAPVVMPTNND
DTRVLLPKNQELMHNPRYEELFAPEYGPENPFRTQQMKAERNMLSGYVEKAHISEFQFEN
QRRTFTSYGYAVDPSTEPIPDSGKGDGIVVSETVAPPVEAEGKSVFEVIKKRPLDKKKRH
KNDNPEDVEGFLGPWGGYVGEQRVMKPEGEIAKELEEIVAKRQKKGKVDDDKPLEEKSIF
HIDKATDYQGRSWLEAPRSETQLRSDTPPAKCFLPKSHIFTWKGHTKGVAAVRWFPKTAH
LMLSAGMDCRVKIWEVYGDRRCVRTYFGHRQAVRDVNFNNEGSHFLSAAYDRYIKLWDTE
TGECVSRFTSRKVPYCAKFHPDTDKQHLFVAGTSDKKIICWDTRTGEVVQEYDRHLGAVN
TITFVDENRRFVTTSDDKSLRVWEWDIPVDMKYIADPSMHSLPAVTVSPNGKWLACQSMD
NKVVVFSALNRFKMNRKKTFVGHMVAGYACSVDYSPDMSYLVSGDADGKCYIWDWKTTKL
YKKWKAHDGVCITSLWHPHEPSRLLTAGWDGVIKYWD
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgttgaacattcaaaattatggtagtagttcagaagacgaagaaaatgactcagaaact
atacaacaacatagtaacgaaaagttattgactcacttgaagcctgttgatccaaattta
tctatagctaagaaaatgcaagtatgtgctgcaccagtagtaatgcctacgaacaatgat
gacacaagagtacttttaccgaaaaatcaagaactaatgcacaatcctaggtatgaagag
ttatttgctcctgaatatggtccggagaatccttttcgaacacaacagatgaaagctgag
agaaatatgttgtcaggttatgtggagaaagcacatataagtgaattccaatttgagaac
cagcggaggacgttcacgagttacggttatgctgtagatccctccacagaacctattcct
gatagtggtaaaggagatggaattgttgtttcagaaacagtggctccaccagttgaagcg
gagggtaaatcagtgtttgaagtaataaagaaaaggccattagataaaaagaaaaggcac
aaaaatgataatcccgaggatgtcgaaggattcttagggccctggggaggttatgtaggc
gagcaaagagttatgaagcctgaaggtgaaattgctaaagagttggaagaaattgtagca
aagagacaaaagaaaggcaaagttgatgatgacaaacctttggaggagaaatctatattc
catattgacaaagccacagactaccaaggcagatcgtggctcgaagcaccgcgcagtgag
acgcagttacgaagtgacactccaccagctaaatgtttcctacccaagtctcacatattc
acgtggaagggtcacactaaaggcgtggctgcggttcgctggttccccaaaaccgctcac
ctcatgctttctgccggcatggactgtagagttaagatatgggaagtgtatggtgaccgt
cgttgtgtgcgcacgtacttcggccatagacaagccgtgcgtgatgttaactttaacaat
gagggttcacactttttgtctgcggcatacgaccgctacataaagctatgggacacagag
acgggcgagtgcgtgagtcggttcacgtcacgcaaagtgccctattgtgctaaattccac
cccgatactgacaaacagcatctatttgttgctggcacttctgataaaaagattatttgt
tgggacacaagaacgggtgaagttgtacaagaatacgaccgacatctcggcgctgtgaac
acaatcaccttcgttgatgaaaaccgacgtttcgtcaccacttctgatgataagagcttg
cgcgtttgggagtgggacataccagtagacatgaagtacatagcggacccatctatgcac
tctttgcccgcggtcacagtatctcccaacggcaagtggctcgcttgtcagtccatggac
aacaaggttgtggtgttcagtgcgctcaatcggttcaagatgaacaggaagaagacgttt
gtgggccatatggtggctggatacgcttgttcagtggattattcgccggatatgagttat
ctcgtgtctggggatgctgacggaaagtgctacatatgggactggaagacgactaaactt
tacaaaaagtggaaagctcacgatggagtctgcataacgtcgctctggcatccgcacgag
cccagcaggttgctcaccgcgggctgggacggcgtcataaagtattgggattaa

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