Colias croceus (clouded yellow): 123693098
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Entry
123693098 CDS
T08651
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123693098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccrc04121
]
123693098
Enzymes [BR:
ccrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
123693098
Ubiquitin system [BR:
ccrc04121
]
Ubiquitin ligases (E3)
HECT type E3
123693098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
123693098
NCBI-ProteinID:
XP_045494008
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All DBs
Position
7:complement(7489194..7502135)
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AA seq
1073 aa
AA seq
DB search
MFCWGNATHHELCIEGSDNLDLVIRPTFSKWKESSHIQFVAAGEFHTLYLTNVGHLYSCG
NNDVGQLGRQAKEEDGKYPGSLVETFKGCSLSAIACGMHHSMAIDEWGQPFSWGSDSMGQ
LGSNLGGHAQDKPKIIKFLATKNVIQIACGFYHSVALTNNGELYAWGANSFGQCGLGTMS
SKTTTPQQIASLVGVPIALVACGSNHTFVLSKSGAVFGFGKNSHGQLGLQDRDNRCYPTH
LKVLRNVKVCYISCGEDFTAFLTLDGGVFTCGSGEYGQTGHGAVKDELVPRKIVELMGST
VTQIACGRRHLLCRVGERVLACGYGARGQLGCPHMAFALVPTPVPFTPNDESPTDNAEQT
KPKKKSKLESTTAFGKQGAGTSKLNFSADMLSGPIKVFAGGDHSFLVLCSDKSSPTDARI
PDSRRQIMTLNIPKIAACEVFKDDDVVNQDLMAYLETVFGSLACINGSFLLQNSAHFGCN
TKMPGVDLMKAQEAFHIISRLENTSIKELIFSHLTENIIKKVKTSPPDAEALRVFLVLPL
YHEMRNPRRHPELQGPFAEAFNKLLVHPQRIVHLWWEAQTGEYFEMLVDIFKSVIVYELM
QPAVRANKKIYFTHSIVQILNTLSTLNKINFTNPKKPKIPAECFYVEDLCSYVDIATDYI
NWLSDQDSLQPHLCNYAFLFDVQCKSLLLKIDQQLQMQMAITRAATQMFTRLFMDPTYPY
QRDQFLNLTVSRNHIVRDTMLQISNHDSSQLKKPLRVEFVGEEAEDGGGVKKEFFLLLLK
EIFDPVYGMFKQSEETNMIWFSNNPFEDDVMYYLIGAIYGLAIYNSIIIYVPFPLVLYKK
LLGESVMLDDLSDLYPTLANSLKHLLDYPDEDVEDVFSLCFAVNTVVFDQIQVHPLKENG
ENLPVTHENKAEYVDLYVDFLLNKSVDNQFKAFNQGFQKVCGGRIIKLFRSHELMSVVIG
NEEYDWDIFESNCEYKNGYTETDPQVRWFWEVFHELSIEDKKKFLLFLTGSDRVPIQGMR
DVKIRIQPVADDRFFPVAHTCFNLLDLPRYKTKERLKYYLLQAIQQTQGFSLV
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgttttgttggggtaatgctactcatcacgaattgtgcattgaaggttcggataatctt
gacctggtcattagaccaacattttctaaatggaaggaaagtagtcatatccaatttgta
gctgcaggagaatttcatactttgtatttaaccaatgttggtcatttgtattcctgtggt
aataatgatgttggacaattaggacgacaagctaaagaggaagacgggaaatatccaggt
tcgcttgttgagacatttaaaggatgtagtttgtcagctatagcatgtggcatgcatcat
tctatggccatagatgaatggggccagccattcagttggggttctgatagtatgggccag
ttgggtagtaatcttggtggccacgctcaggataaaccaaaaattattaaatttctggcc
acaaaaaatgtgattcaaattgcctgtggattctaccattcagtagcattgactaataat
ggtgaactatatgcttggggagcaaacagttttggtcagtgcggattgggcacaatgtca
agtaagacaaccacaccgcaacagatagcatcattagttggagttccgatcgctctggtg
gcttgcggtagtaatcacacatttgtgttatcaaagtcaggtgctgtgtttggatttggt
aaaaacagtcatggtcaactgggactacaagatagagacaatagatgttatcccacacat
ttgaaagttttgagaaatgtcaaggtttgttatatttcatgcggggaagattttactgcc
ttccttactcttgatggcggtgtctttacatgtgggtccggtgaatatggacaaacagga
catggtgcagtgaaagatgaactggtacctaggaagatagtagagctgatgggcagcacg
gtgacgcagatagcgtgcgggcgccggcacctgctgtgccgcgtgggcgagcgcgtgctg
gcgtgcgggtacggcgcgcggggccagctcggctgcccgcacatggcgttcgcgctcgtg
ccaaccccagtaccgttcacgcctaatgatgagtcgccgactgataatgctgagcagact
aagccaaagaagaaatccaagctggagagtacgactgcattcggtaaacagggcgcagga
acctccaaacttaatttctcagcagatatgctgagcgggcctataaaggtgtttgctggt
ggtgaccacagtttcttagtgctttgcagtgataaatcgagtcccacagacgctaggata
ccggatagtaggcgacaaattatgacgctaaacatacctaaaatagccgcttgtgaggtc
ttcaaagacgatgatgttgtaaatcaagaccttatggcgtacttggaaacagtgttcggg
tcgttagcgtgtatcaacggctcattcttgttacaaaacagtgcgcactttggttgtaac
actaaaatgcctggcgtagatctcatgaaggcacaagaggcttttcatattataagtcga
ttagaaaatacttctataaaagaacttatatttagtcatttaacggaaaatataattaag
aaagtgaaaacatccccacctgatgcagaagcactgagagtgtttctcgtattgcctttg
tatcatgaaatgaggaatccgcgaagacatcctgaattacagggtccgttcgcggaagca
ttcaacaagttactggttcacccgcaacgtattgtgcacctttggtgggaggcacaaacg
ggcgagtattttgaaatgttggtggacatattcaaaagtgtcatcgtgtatgagcttatg
cagccagcggttagggctaataagaaaatatatttcacacatagcatcgttcaaatatta
aatactctctctacactaaataagataaacttcacaaatcccaagaaaccgaaaatacca
gctgaatgtttctatgtagaagatctctgttcatatgtggatatagcgacggattatatt
aactggctctctgaccaagattccttacagccacacctctgcaactacgcgttcctcttc
gacgtgcaatgcaaatccttacttctaaagatagaccagcaattgcaaatgcaaatggcg
atcacaagagcggctacacaaatgttcacacggctgttcatggaccctacttatccgtac
caaagagatcagttcctcaatctgacggtatctaggaaccatattgtgcgcgatacgatg
ctacaaattagcaatcatgatagttcacagctgaagaaaccgcttagagtagaattcgtg
ggcgaggaggcggaagacggtggtggtgtgaagaaggagttctttttgttattgctcaag
gaaatattcgatcctgtatacggaatgttcaaacagtcggaagaaactaatatgatttgg
ttctcgaacaatccgtttgaggatgatgttatgtattatttaattggtgcaatatatggc
ctagctatatacaattcgataataatatacgtgccattccctctcgtgttgtacaaaaag
ttgttgggagagtctgtgatgttggacgatctatcggatttgtatcccacgttagctaat
agccttaagcatctcttagactatcctgatgaggatgttgaagacgtattcagcttatgc
ttcgcagtgaatactgtagtctttgatcaaattcaagtccatccactcaaagagaatggg
gaaaatttgcccgtcactcacgagaacaaggcggagtacgtcgatctatatgttgacttt
ttgctcaataaatctgtagacaatcagttcaaagcatttaatcagggtttccagaaagta
tgcggcggtaggataataaaattatttagatcccacgagctaatgtcagtggttattggt
aatgaggaatacgattgggacatatttgagagtaactgcgagtataaaaacggttatacg
gagactgatccgcaagttagatggttttgggaagtctttcacgagttatctattgaagat
aagaaaaagttcttacttttcctaactggaagcgaccgcgtgcccatacaaggcatgaga
gatgtaaaaataaggattcaaccagttgccgacgaccgtttcttccccgtcgctcacaca
tgcttcaacctcctggacctccctcgctataagacaaaagaacgccttaaatactatctc
ctccaagctattcaacaaacacaaggattttcactcgtctaa
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