Colias croceus (clouded yellow): 123693243
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Entry
123693243 CDS
T08651
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccrc04121
]
123693243
Ubiquitin system [BR:
ccrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
123693243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
123693243
NCBI-ProteinID:
XP_045494199
LinkDB
All DBs
Position
7:7502451..7528755
Genome browser
AA seq
1664 aa
AA seq
DB search
MSVTPLRDNELLIIYETKNSIWFAEVIQRIKSYKFGVYSDKVAGPSNNNGKAGRAAVPVD
VGSPLLDWEEGDHFSFEDSERFEEDSLCSWSSEPESLCNNWRGWRRPNLPNSFAPRPTKK
STQEKSVSTLSELAAKCVASHIPFELVEHVYPPVPEQLQLQIAFWSFPDSEDDIRLYSCL
ANGSADEFQRGEHLFRDKAVKDVLQIGFHLSATVTLTMARTQFNVAVTFDRQKISSCNCT
CSSSAHWCSHIVAVCLFRIHLPTQVCLRAPVSESLQRLRRDQLQKFAQYLISELPRQILP
TAQKILDELLSAQPNQINTTCGAPDPTAGASAYEYTSWFLDEKTLHNNINKILVKFCVPT
PIVFSDVNYLSTSAPPAAAEWSSLLRPLRGREPEGMWNLLSIVREMFKRSDRNAIPLLEI
ITEEVMACEQIIVWWYSTKAALVAWGGGTGGKHGGSGGNSAAQHACSSLCDEVVVLWRLA
ALNPGLAPHERDTLHEQFTQWHMKVLDKVAKNRNNHINSSHPRHGRAHSHPPFINGISEN
EVFPGFNPAMEACFLEWDDYQIVGVTYTKDLNPLYHSPFTIFRHSDKQIDSVHQVNSSKA
VLNNEMSLSYRLTNPDPSMQGHRTLVNRTSRINVDLAIAGPSNEACGSGDGVGEPVRDPG
PSDGNHSSVSSEGFCENEEEMQVSGADGGDTDSQDSTSPQGSSDDARQPRDDSVSDDECH
LYYYDSNAARRIADGGVALMNGQGGSGLGAGGSGASWECGWEVQFARAEGLHAHGHARDA
CALGASLAKDLLARPPALLGMTAAELRRARRRHTPSPRLCAASHRLSCLASATLAKCAFL
CTVLAEFSEQHELAFRVGLFALEMARPPASTKALEVKLNNQESELVALLKKLPTGAEQLA
LAREKAEQLRDGLLRSRGPALLPISLASFLFEVLVLSASENKHPARLMTDEVLGFEAAVA
ALGLKANVSEAEHPLLCEGTRRQRGDLALTLLSFYKDDPVKLARIMNKLLDRDIHQLTKG
PMVSMYYSSNPRFSSRTEHHYHHQPLNVPVAGPVCSLSGDIERLSIGESSGSPPTGPHSV
HSAHSAHSTHSAHSSHQHASSHSSLPRLKDTRYKGKRQYPSVPNQPSEASAHFMFELAKS
VLFKAGGSSSTSLFTQTTCAREHHGPHRGLHMAAFQLGLYALGLHNCVSANWLSRTYSSH
VSWITGQAMDIGAPAILFLIDAWEGHLTPPEAAGIADKASSGRDVQTVRAAAELALSVLP
HAHALNYNEIQRAVLQCKEQSDAMLERACLTVEAAAKGGGVYPEVLYTVARYWHELYLRQ
ASEDEPDEPYRAPPPLAVPLPYPLAYPFTYHYPPHIYQLQFECPQYGGAPATHAGPQYAI
PQYFVRGIVPSHAAHAPQHAQLAPHVPLPPHPPHPPPPIPVNVSHPAPIPPPLPAAHPGH
AGVGVGVGVVPVSGVAGNNVGAPMGSVAPLPGAGPPALPQAQLRRLLAAYRVGMLALETQ
ARRVHDDRPQNKFGRNPPYGEHVKWLLRISKRLGAQYLHQFCVCAVNSVVSPFVLYELCV
ESAHWLARGGPHHLVMQHLRGTLAPLVHKCQQMYIQCIHQKLYHLTAVEYEEFVGIVLSA
RTAFQLTPEGNTQFKEWLASLRRSKSCKKDLWTQLNAALQTNGK
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaacaccactacgagacaatgaacttttgatcatatacgaaacaaagaattct
atatggttcgctgaagtgatccagcgaattaaatcttataaatttggagtatattccgat
aaagtggcggggccatcaaataataatgggaaggcgggacgagcagctgtcccggtggac
gtgggatcacccttacttgattgggaagaaggagaccacttcagttttgaagactcggaa
agatttgaagaagattctttgtgtagttggagttcagaacccgaaagcctatgtaataac
tggcgaggttggagaagacccaatttaccaaattcctttgcgcctcgtccgacgaaaaaa
agcactcaagaaaaatcagtatctacactaagtgagttagcagcgaaatgtgtagctagt
cacataccatttgaactggtagaacatgtgtatccacctgtgccagagcaacttcaatta
caaattgccttctggagtttccctgatagcgaagatgacatacgattatactcatgcctt
gctaatggatctgcagacgaatttcaaagaggagaacatttatttagagacaaagctgtt
aaagatgtgttacagattggattccacttatcggcgactgtcacacttacaatggcaaga
acgcaatttaacgtagcagtaacatttgacagacaaaagatatcatcatgtaactgtact
tgttcgtcatcagctcattggtgttcacatattgttgctgtttgcctgtttagaatacat
ttgccaactcaagtatgtctcagggcaccagtatccgagtctctacagagattacggaga
gatcaattgcagaagtttgcacagtacctcatatctgaattgcctcgtcaaatattacca
acagctcaaaagatattggatgaattattatcggcgcaaccaaaccaaataaacacaacg
tgcggcgcaccagatcccacggccggagcctcagcctatgaatatacctcgtggttcctg
gacgaaaagactttacataataatattaataaaatattagtcaaattctgtgttccaaca
cctatcgtgtttagtgacgtaaactacttaagcacgagcgcaccaccagcagcggctgaa
tggtcgtcacttcttcgtcctctgcgtggccgcgagcccgagggcatgtggaacctgctc
tctatagtacgggagatgttcaagcgcagcgaccgcaatgctataccgctgcttgagatc
atcactgaggaggttatggcttgtgaacagataatagtgtggtggtacagcacgaaggca
gcgctggttgcgtggggcggtggtacgggcggcaagcacggtggtagtggtggcaactcc
gccgcgcagcacgcgtgttcttcgctgtgtgatgaggtggttgttctgtggcgtctcgct
gctttgaatccgggtctggcgccgcatgagagagacacattacacgaacagttcactcaa
tggcatatgaaggttttggataaggttgctaagaatcgaaacaaccacataaactcgtca
catccccgtcatgggcgtgcgcactcccacccgccatttatcaacggcatcagtgagaac
gaagtgttcccaggttttaacccagcaatggaagcttgcttcctcgagtgggacgactat
cagatcgttggagttacttacactaaggacttgaatccgttgtaccacagtccgttcact
atattcagacattctgataaacagattgatagtgtacatcaggttaactcgtcaaaagca
gtacttaataacgagatgtcgcttagctatcgactgactaatccagacccgtcgatgcaa
ggccatcggacactagtcaacagaactagtcgtatcaatgttgatctggcaatagctgga
ccctctaatgaggcgtgtggatcgggagacggtgtaggtgaacctgttagagatccaggc
ccaagtgatggaaatcattctagtgtatcttctgaaggtttctgcgagaacgaagaagag
atgcaagtgagcggcgcagacggcggggacacagactcgcaggactccacctcgccgcag
ggctcgtcggacgacgcgcgccagccgcgggacgactccgtgtcggacgacgagtgccac
ctgtactactatgactcgaacgccgctaggaggatcgcggatggcggtgtggctctgatg
aacgggcaagggggatcaggtctcggcgccggcggtagcggcgcgagctgggagtgcggg
tgggaggtgcagttcgcgcgcgcggaggggctgcacgcgcacggacacgcgcgtgatgcg
tgcgcgcttggcgccagtctggcgaaggatctgctggccagaccgcctgcgttgttaggt
atgaccgcggcggagttgcgtcgcgcgcgccgccggcacacgccgtcaccgcggctgtgt
gcggccagtcaccgcctgtcctgcctcgcgtctgccacgctggccaagtgcgcgttcctt
tgcactgttctggctgaattcagtgaacaacacgagttagccttccgagtgggtttattc
gctttggaaatggcacgtccaccggccagtactaaggctttggaggtgaaactaaataac
caagagtcagaacttgtagctttactgaaaaaattgcctactggtgccgaacagttagca
ttagcaagagagaaggcggaacaactcagagatggactattacgaagccgtggtccagcg
ctattacccatatcgctagcgagtttcctttttgaagttctcgtcttgtcagcctcggag
aataaacatcctgcaagactgatgacggacgaagtgctaggcttcgaagcggcggtcgcg
gctctagggctaaaagcgaacgtttctgaggcagaacatccgttattatgtgagggtaca
aggcgacaacggggtgaccttgcgctgacactgctctcgttctataaggacgacccggtc
aaattggcgaggattatgaataagctattggatcgtgatattcatcaactgacgaaaggt
ccgatggtcagcatgtactactcaagcaatccacggttcagctcgcgcacagaacatcat
tatcatcatcagccattgaatgtgcctgttgctggtccagtatgcagtctctccggggac
atagagcgtctctctataggcgaaagcagcgggtcacctcccactgggcctcactcagtg
cactcagcacactcggctcactcaacacactctgcgcattcgtcgcaccaacatgctagt
tcacactcatcgcttccaagattgaaggatacgagatacaaagggaaacgtcagtacccg
tcagtgccgaaccagccgtcagaagcgtcagcacacttcatgttcgaattggcgaagtca
gtgttgttcaaggcgggcggttcgtctagcaccagtctgttcacgcagacgacttgcgca
cgagaacatcatggtcctcataggggtttgcacatggcggcattccaacttggattgtac
gcactgggtcttcacaactgcgttagcgctaattggctgagccgtacttactcttcacac
gtaagctggattacaggtcaagcaatggatatcggcgcgccagcaattctattcttaata
gatgcatgggaaggacatttgacaccgcccgaagcagctggaatagcagataaggcgtca
tcaggtcgcgacgtgcaaacagtccgcgcggccgccgagctcgcgctatcggtgctgccg
cacgcgcacgcgctcaactacaacgagatccagcgcgccgtgctgcagtgcaaggagcag
agcgacgcgatgctcgagcgcgcctgtctcactgtggaggccgcggctaaaggcggcggc
gtgtaccccgaggtgctgtacacggtggcgcgctactggcacgagctgtacctgcggcag
gccagcgaggacgagccggacgagccgtaccgcgcgccgccgccgctggccgtgccgctg
ccctacccgctcgcctaccccttcacgtaccactacccgccgcacatctaccagctgcag
ttcgagtgtccacagtacggcggcgcgccggccacgcacgcgggcccgcagtacgcgatc
ccgcagtacttcgtgcgcggcatagtgccgtctcacgccgcgcacgcgccgcagcacgcg
cagctcgcgccgcacgtgccgctgccgccgcacccgccgcaccccccgccgccgataccc
gtcaatgtctctcatccagcgccgataccgcctccactacccgctgcccaccctgggcac
gctggcgtgggcgtgggcgtgggcgtcgtgcctgtgagtggcgtggccggtaacaacgtg
ggcgcgcccatgggcagcgtggcaccgttaccgggtgctggtccaccagccttaccgcaa
gctcagcttagacggttattagctgcttatcgtgtgggcatgctcgcgttggagacgcaa
gcgagaagagtacatgacgaccggccgcagaataagtttggcaggaacccaccgtacggc
gagcacgtgaagtggctgctgcgcatctcgaagcggctgggcgcgcagtacctgcaccag
ttctgcgtgtgcgcggtgaactcggtggtgtcgccgttcgtgctgtacgagctgtgcgtg
gagtcggcgcactggctggcgcgcggcggcccgcaccacctggtgatgcagcacctgcgc
ggcacgctggcgccgctcgtgcacaagtgtcagcagatgtacatccaatgtatacaccag
aaactgtaccacttaacggcagtggagtatgaagaattcgtaggcatcgtcctctctgct
cgcacggcgttccaattgacgccggaaggaaatacacagtttaaagaatggcttgcctcg
ttgcgcaggtcgaaatcgtgcaagaaggacctctggacgcagctgaacgcggcgctgcag
acgaatggcaaatga
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integrated database retrieval system
