KEGG   Colias croceus (clouded yellow): 123693924
Entry
123693924         CDS       T08651                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123693924
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccrc03041]
    123693924
   04121 Ubiquitin system [BR:ccrc04121]
    123693924
Spliceosome [BR:ccrc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    123693924
Ubiquitin system [BR:ccrc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123693924
SSDB
Motif
Pfam: SART-1 HIND LcrG
Other DBs
NCBI-GeneID: 123693924
NCBI-ProteinID: XP_045495151
LinkDB
Position
8:complement(11331204..11347077)
AA seq 742 aa
MGSKKHKKESKKKKHRSRSRSPLDGEERERKRHRKHKDRKKDRSPDVEEVPVDSHLQSKE
DRSRSRSRSTSAAPSQKDDRNSEKSAEAERSQSPVSAPANAQESLSIEETNKLRAKLGLK
PLEVAEKPAEDGKIKDDLGEFYHKPAPNIAAQKKSDKMREKLEERREKRKMETKLKTTLL
TEGSDDEDAAAWIKKSRQLELQKREAEKRAAMLDELDAEFGVGALVAEEQQQHRSRSYAQ
KHLRGLRVAHDVTALPEERETILTLADKDVLAEDSEDVLVNVNMLDEERYKKNIEERRKA
AAGYQAYDEESELAASLGFARPLLSKYDETIDPEKKKADKGFVLGDEAALQASRFREMMR
QERLAGGPDKRLESLSVPAPQLAADYMDEHEISAKFKKFKKKGKFRKKPKQEPIDVEDYA
EGNAPLHTDDTDVPAGSVGSAALAEDEDETEVDGELQAALARARRLTQASAPPVPKVEEI
LEKVKKEEHMSDEEDTGPGMVLDATAEFCRTLGDIPTYGLAGNRDTTTEIMDFEKTEVEP
EPEVEQSSGAWSRVDIGSEKPADLVAGSSVGLAAEPALGAGVAGALQLALSKGYLEKNAA
PAAAPRAAHALLHAKHYSIEDKTYGEDDKAGRRERQHHSHGGSEFREKSNFRPSVKLEYV
DDDGRPLCPKEAFRYLSHKFHGKGPGKNKQEKRIKKQQQEGLMKKMSSTDTPLGTLHMLQ
QKQKETHSPYIVLSGTKRDTNN
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgggatccaaaaaacacaagaaagaatcgaaaaagaagaagcacaggagtaggtcacgc
tcgccattagatggcgaggagcgggaacgaaaacgccaccgaaaacacaaagatcgcaag
aaggatcgctcgcccgatgttgaggaggtaccggtagactcgcacctgcagtcgaaggaa
gatcgatctcgctcacgcagccgcagcacgagcgccgcgcccagccagaaagatgataga
aacagtgagaaaagcgcggaggctgagaggtcccaatcgcccgtgagtgctccggccaac
gcacaagagagcctctctatagaggagaccaataagttgcgagccaaacttggtctgaag
cctttggaggtcgctgagaaaccagcggaagatggcaagatcaaggatgacctgggcgag
ttctaccacaagccggcgccgaacatcgcggcgcagaagaagtcggataagatgcgcgag
aagttggaggagagaagggagaagaggaagatggagaccaagttgaaaacaacacttcta
acagaagggtctgatgacgaggacgcggctgcttggatcaaaaagtctcgacaacttgaa
ctacagaaacgggaagctgagaaacgggcggcgatgctggacgagctggacgcggagttc
ggtgtgggcgcgctggtggctgaggagcagcagcagcaccgcagccgcagctacgcgcag
aagcacctgcgggggctgcgggtcgcgcatgacgtcaccgcgctaccagaagagcgcgaa
acgatactaacactagctgacaaggacgtactagcggaggacagtgaggatgtgctcgtc
aatgttaacatgttagatgaggagcggtataagaagaacatagaagagcgtcgcaaagcg
gccgccggctaccaggcgtacgacgaagagagtgaactagctgcgtcactcggttttgct
cgtccacttctctccaagtatgatgaaactatagatcctgagaagaagaaggcggataaa
ggattcgtgctgggagacgaagccgcgctgcaagctagtcggtttagagagatgatgcga
caagagcgtctagcgggcgggccggacaagcggctggagtcactgtcagtaccggcgccg
caacttgcagccgactatatggatgaacatgagatatccgccaagttcaagaagtttaag
aaaaagggcaagttccgcaagaagccgaaacaagagcctatcgacgtggaagactacgcc
gagggcaatgcgcccctgcacactgacgatactgatgtaccggctggatcggttggtagt
gctgcattagcagaagacgaagatgaaacagaagtggacggtgagctacaagctgcccta
gcgagggctcggagactcacgcaggcctccgcccctcctgtacctaaggtggaagaaatc
ctcgagaaggtgaagaaggaagaacacatgtctgatgaggaagacactggacctggtatg
gtgttagatgctacagcggagttctgtcgcaccctgggggatatacccacgtacgggctg
gctgggaaccgggatactactactgagattatggacttcgagaagacagaagtggagccc
gagcccgaggtggagcagagttcgggcgcgtggagcagagtcgacatcggcagtgagaaa
cccgctgaccttgtagcgggttcgtcagtagggctggcagctgaaccagcgctgggcgca
ggtgtggctggagctctgcagctggcgctcagcaagggatacttggagaagaacgcagca
cctgcagctgctccccgcgctgcgcatgcgctgctgcatgctaaacattactccatcgag
gataagacttatggcgaggacgacaaggcgggtcgccgcgagcgccagcaccactcgcac
ggcggcagcgagttccgcgagaagagcaacttccgacccagcgtgaagctggagtacgtg
gacgacgacggccggccgctctgccccaaggaggccttccgctacctctcgcacaagttc
cacggcaaggggcccggcaagaacaagcaggagaagcgcatcaagaagcagcagcaggag
gggctgatgaagaagatgagttccacggacacgccgctgggcacactgcacatgctgcag
cagaaacaaaaggaaacacactcgccgtatattgtgttgagcggcaccaagcgggatact
aacaactaa

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