Colias croceus (clouded yellow): 123693993
Help
Entry
123693993 CDS
T08651
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123693993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123693993
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123693993
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123693993
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123693993
mRNA degradation factors
5'-3' decay
Decapping complex
123693993
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123693993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
123693993
NCBI-ProteinID:
XP_045495238
LinkDB
All DBs
Position
8:7139327..7144550
Genome browser
AA seq
443 aa
AA seq
DB search
MMTENRISSSNHVGNSLNNQKGDVDKTVDDIGWKSKLKLPPKDRRIKTSDVTDTRGNEFE
EFCLKREILMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVD
PKKDYIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVII
ATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATF
PLSVKQFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF
CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDV
QAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKPI
PKVIDPALYVARTPGEDDDGADK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaaatagaattagttcaagtaatcacgtcggaaacagtttaaataatcag
aaaggagatgtcgataaaacggttgacgacattggatggaaatcaaaattaaaactaccc
cctaaagatagaagaataaaaactagtgatgtaacagacacaagaggaaatgagtttgaa
gagttttgcctaaagagagaaatccttatgggtattttcgaaaagggatgggaaaagcca
tcccccattcaagaggcttcaatacccattgctctcagtggtaaggatgtactcgcaagg
gccaaaaacggaaccggcaaaacgggcgcatattgtattccagtcttagaacaggttgat
ccaaaaaaagattatattcaagctttaattgtggtaccaactcgagagctagccttacag
acatcacaaatctgcatcgaactagcaaaacacacagatatacgtgtaatggtcactaca
ggaggcacaaacctgagggatgatattatgcgtatataccaaaatgtccaagtaataatt
gccacacctgggcgaatgattgatctcatggataagcaagtagccaaaatggaccagtgc
aggatgctggtattagatgaggcagataaacttctttctcaagactttaagggcatgtta
gatatggttatctcaagattaccaaaagaacgccaaatcttgctattctcagcaaccttt
ccattaagtgtgaaacagtttatggagaagcatctccgagaaccgtatgagattaatctt
atggaagagttgacactaaagggagtcacacagtactatgctttcgtacaagagagacaa
aaagtgcactgtttaaataccctcttttcaaagttgcaaataaatcaatccatcatattc
tgcaattccacccaacgcgtagagttacttgcaaagaaaatcacagagctgggctactgc
tgttattacattcacgcgcgtatggcgcaagcacaccgcaaccgcgtgttccacgacttc
cgcgcgggtctgtgccgcaacctggtgtgctcggacctgttcaccaggggtatcgacgtg
caggcggtgaacgtggtcataaacttcgacttcccgcggatggcggagacgtacctgcat
cgcattgggcgctcgggccggttcggccacctcggtatcgccatcaacctgatcacgtac
gaggaccgattcgccctgcaccgcatcgagcaggagctgggcacggagatcaagccgatc
ccgaaggtcatcgacccggcgctgtacgtggcgcgcacccccggcgaggacgacgacggc
gcggacaagtaa
DBGET
integrated database retrieval system