Colias croceus (clouded yellow): 123694248
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Entry
123694248 CDS
T08651
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123694248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrc03041
]
123694248
03009 Ribosome biogenesis [BR:
ccrc03009
]
123694248
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123694248
Spliceosome [BR:
ccrc03041
]
Complex A
U1 snRNP components
U1 related factors
123694248
Complex B
123694248
Ribosome biogenesis [BR:
ccrc03009
]
Eukaryotic type
Pre-60S particles
Helicases
123694248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
123694248
NCBI-ProteinID:
XP_045495589
LinkDB
All DBs
Position
9:complement(5296695..5300905)
Genome browser
AA seq
539 aa
AA seq
DB search
MSGNWNNNRGGSGGSKFGGGGGGGGRFGGSKFGGGGGGGKFGGNNGYGNKKEFSGGQNMR
RPNWDSMSLQPFNKNFYNPPPAILNRSPYEVEAYRNKHEITISGVDVPHPIEKFDEANFP
DYVMQSITNMGYKDPTPIQAQGWPIAMSGKNLVGIAQTGSGKTLAYILPAIVHINNQQPI
RRGDGPIALVLAPTRELAQQIQQVATDFGNAAYVRNTCIFGGAPKREQARDLERGVEIVI
ATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATW
PKEVKKLAEDYLGDYMQINIGSMQLSANHNILQIIDICQEHEKENKLNTLLQEIGENQDP
GSKTIIFVETKRKVENITRNIRRYGWPAVCMHGDKTQQERDDVLNQFKQGRATILVATDV
AARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKDLVSVL
QEANQIISPQLQSMADRCGGGGGGWNRNRFGGGRGGGTFKRGGNFGRSNGTSHKRFNDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaattggaacaataatcgtggtggtagcggtggttccaagtttggaggagga
ggcggcggcggaggaagatttggtggatcaaaatttggcggaggcggtggcggcggtaaa
tttggcggtaataatggatatggtaacaagaaagaattctcaggagggcagaacatgcgt
cgccccaactgggattccatgtccctacagccattcaacaaaaatttctacaacccaccg
ccagccatactaaacagatcaccatatgaggtagaagcttatagaaacaaacatgaaata
accatcagtggtgtagatgtacctcacccaattgaaaagtttgatgaagcaaacttccca
gactatgtcatgcaaagtatcactaatatgggctataaggacccaacaccaatccaagcg
cagggatggcctattgctatgtctggaaagaacttagtgggcattgcccaaacgggttct
ggcaaaacattggcatatattttacctgctattgttcatatcaacaatcaacaacctata
aggcgaggcgatggtcctattgcgttggtattggcacctacaagagagcttgcccagcaa
attcaacaagttgctactgattttggaaatgcggcctatgtccgtaacacatgcattttt
ggaggggcacctaaaagggaacaagcccgtgacttggaaaggggtgtagaaattgttatc
gcaacacctggaagacttattgattttctagagaagggtactaccaacttgcaacgttgt
acatatcttgtacttgatgaagctgaccgcatgttagacatgggttttgaacctcaaatc
agaaaaattattgaacaaatccgcccagacagacaaacattgatgtggtccgcaacatgg
cccaaagaagtgaaaaagctggcagaagattatcttggtgattacatgcagatcaatatt
ggatcaatgcagttgtcagcaaaccataacattttacagattatagatatttgccaagag
catgaaaaagaaaataaattgaatacattattgcaagaaattggagaaaatcaagatcct
ggttcaaagacaattatatttgttgagaccaagaggaaagtagaaaatatcacaaggaat
attagacgatatggatggccggcagtatgtatgcacggtgataagacacaacaagagaga
gatgatgtattaaatcaattcaaacaaggcagagctacaattcttgtagcaactgatgtt
gctgctagaggacttgatgtggatggaattaaatatgtaataaactttgattatcctaac
tcatctgaggattacattcaccgaattggtagaacaggacgatcaaaatcaaaaggaaca
tcatatgcatttttcacaccttcaaattcgcgtcaagcaaaggacctggtctcagtctta
caggaagctaaccagataatcagtcctcaattacaatcaatggctgacagatgtggtgga
ggtggcggaggatggaacaggaataggtttggtggaggaaggggtggtggaactttcaaa
cgaggaggaaactttggaagaagtaatgggacatcccacaagagatttaatgactactaa
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