Colias croceus (clouded yellow): 123694345
Help
Entry
123694345 CDS
T08651
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123694345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrc03041
]
123694345
03009 Ribosome biogenesis [BR:
ccrc03009
]
123694345
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123694345
Spliceosome [BR:
ccrc03041
]
Complex A
U1 snRNP components
U1 related factors
123694345
Complex B
123694345
Ribosome biogenesis [BR:
ccrc03009
]
Eukaryotic type
Pre-60S particles
Helicases
123694345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF5335
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
123694345
NCBI-ProteinID:
XP_045495711
EnsemblRapid:
ENSCEUG00000019744
LinkDB
All DBs
Position
9:10401586..10410750
Genome browser
AA seq
665 aa
AA seq
DB search
MYDDRRGGRGGGRGGPRGGGRGRGGSRGGRSADRSLERGSRFGGSSEGRGGRDGGRGSGR
GFRGRGGRDGRDRDDFRGNFKNEQPGGALRKIRWDTITLIPFQKNFYTPHPNVQMRSMAE
VENYRSLHQITVKGRDVPPPSMYFEEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGR
DMVGIAQTGSGKTLAYILPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQALVSMNG
NAAERDRIPGPMDVVATDFGQNVQVRNTCIFGGAPKGPQGRSLERGVEIVIATPGRLIDF
LEKNTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQNLAE
EFLHDYIQINIGSLSLSANHNILQIVDVCEEWEKNDKLLTLLNEISSEEETKTIIFAETK
RKVDEITKTINRAGWRALAIHGDKNQQDRDYVLSQFRQNQGGILVATDVAARGLDVEDVK
FVINYDYPNNSEDYVHRIGRTGRSHNTGTAYTLFTPNNSAKAKDLMSVLQEANQVVNPKL
MELAQCGMGFKGKFNRGRYRDRDDEPRGGGRGRGGGRGRPDRGSRWDNNDSSNGFQGSSF
NRPEGGFPRQTFNRDQGRESFRGRGRGRGRGSFSSYGQGNAGYDQSQGYQQNSYYNMYSQ
PAEQN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgatagacgtggaggccgtggcggtggacgtggaggtccaaggggtggcgga
agaggtcgaggcggatcgagaggtggtcgttcggctgatagatcactagaaaggggaagt
aggttcggaggaagcagcgaaggccgcggtggtagagatgggggcagaggtagcgggaga
ggtttcagaggtcgaggcggccgtgatggtagagatcgcgacgacttccgtggcaacttc
aaaaacgagcaacccggtggggcgcttcgtaaaatacgctgggacaccatcacgcttata
ccattccagaaaaacttctacactccccaccctaacgttcaaatgcgctctatggccgaa
gttgaaaattacagaagcctgcatcagataacagttaaagggagagacgtaccgcctcct
agtatgtattttgaagaaggtggcttccctgattatgctatgaaggaaattttgaagcaa
gggtttccgaatccgacaccaattcaagcacaaggttggccgattgctctatctggaaga
gatatggtggggattgctcaaacaggatcagggaagacgctagcttatatcttgcctgct
attgtacatataataaatcaaccgcggttacttcgggatgatggcccaatcgtccttgtc
ttggctccaacaagagaattagctcagcaaatccaacaggctctagtatcaatgaatgga
aacgcagcggaaagggacagaattcctggccccatggatgttgtagcgacagactttggt
cagaatgtgcaagtacgcaacacctgtatatttggtggggctccaaaggggccacagggc
aggtccctggaacgaggggtggaaattgttatcgctactcctggaagactgattgatttc
ttggaaaagaatacgacgaatcttcgtcgctgcacttacctagtattggacgaggcagac
agaatgttggacatgggctttgagccacagatccgcaagattattgaacaaatccgacct
gatagacaggttctcatgtggtcagcaacatggccaaaggaagttcagaatctagctgaa
gagtttctacatgattacatacaaataaacattggttcactgtcgctatctgccaaccat
aatatcctgcaaatagtcgatgtttgcgaggaatgggagaagaatgataaactgttgacg
cttctcaatgagatatcttcggaggaagaaactaaaactatcatatttgcggagactaag
aggaaggtggatgaaataacaaaaacaataaaccgcgccggctggcgtgctctcgctata
cacggcgacaagaaccaacaggatcgtgactatgtactgagccagttcagacaaaaccag
ggcgggatactagtcgccactgacgtagcggccagggggcttgacgtggaggacgtgaag
ttcgtgatcaactacgactatccgaacaactcggaggactacgtgcaccgcatcgggcgc
acgggccgctcgcacaacaccggcaccgcctacacgctgttcacgcccaataattccgct
aaggcgaaggatttgatgtcggtgctgcaagaggctaaccaagtggtgaatcccaaactg
atggagttggcgcagtgcggtatgggcttcaagggaaagttcaaccgcggcagataccgc
gacagagatgacgagccacgtggtgggggacgcggcaggggaggcggtaggggccggccc
gatagaggatcaagatgggacaacaacgactcgtccaacggcttccaagggtcatcgttc
aaccggcccgagggaggcttcccccggcagaccttcaacagggaccagggcagggagtcg
ttccgtggccgtggacgtggtcgtggtcgtggcagcttcagtagttatggtcaaggcaac
gctggctacgaccagagccagggttatcagcagaacagctattataatatgtactcgcag
ccggctgaacaaaattaa
DBGET
integrated database retrieval system
