Colias croceus (clouded yellow): 123694499
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Entry
123694499 CDS
T08651
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123694499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrc03041
]
123694499
03009 Ribosome biogenesis [BR:
ccrc03009
]
123694499
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123694499
Spliceosome [BR:
ccrc03041
]
Complex A
U1 snRNP components
U1 related factors
123694499
Complex B
123694499
Ribosome biogenesis [BR:
ccrc03009
]
Eukaryotic type
Pre-60S particles
Helicases
123694499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
123694499
NCBI-ProteinID:
XP_045495904
EnsemblRapid:
ENSCEUG00000019343
LinkDB
All DBs
Position
9:complement(5286413..5291082)
Genome browser
AA seq
534 aa
AA seq
DB search
MAQNIIRNLLRRKEFSIVFCPTVRNSAPGNPVLKQLVRSTASFHHAYFQKYSLEQNNLYR
KNRFYSVNAAEKTDQDYINEHKITIIGEDVPKPYRDIDVSGFPDYIKSFLKEQGFTSPTV
IQSQAWPIALKGDNFVGIAQTGTGKTLAYLLPAVVHIKETQARRGKGPRVLVLAPTRELA
RQIEEVAKEFQKSLNIRSLCIYGGVSRSRQAEELNHGVDILIATPGRLNDFIDSKVTNLS
RCGYVVLDEADRMLDMGFEPQIRRALEGVPHERQILMFSATWPKEVQYLAKDYLGKFVQV
NVGSTDLTANHNITQHIHIVEQHEKMDKLKQIMHDISGSGFGKILVFTNTKRFVDSLTLT
LRRNNWSAVGIHGDKSQMQRDIIINKFRSGGTNILVATDVAARGLDVDGITHVINYDFPN
TTEDYIHRIGRTGRSQNKGVSHTILSEEDGRQAKSLIAVLKEANQEIPEDLELLARDYNN
SKNVERRSNPKHYQKGYNNRSYTNNYRSNNNYRSNNNYRSSNKRWQSYDREDYY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaatattataaggaatttattgcggcgtaaagaattttcgattgtattttgc
ccaacagtaagaaattcagctccaggaaatccggtcttgaagcaattagtccgatcgaca
gcatcatttcatcatgcttatttccaaaaatattcattggagcagaacaacttatataga
aaaaaccgtttttactctgtaaatgcagcggaaaagacagaccaagattatataaatgaa
cacaaaataacgattattggtgaggatgtaccaaaaccatacagagatattgatgttagt
ggatttccagattatatcaagtctttcttaaaagagcaaggattcacaagtccaactgtt
atccaatcccaagcgtggcctatagcactaaagggtgacaattttgttggtattgcacag
accggtacaggtaaaacactggcatatcttttaccagctgttgtacatattaaagagaca
caagcgaggcgaggtaaggggccaagggtactagttttagcaccaactagagaattagcc
agacaaattgaggaggttgcaaaagagtttcagaaatcattaaatattcgtagtttgtgt
atatatggaggagttagtagatcacgacaagctgaagaactaaatcatggtgttgatata
ttgatagcaactcctggaagactaaatgattttattgatagtaaagtaacaaatctttca
agatgtggttatgttgttttggatgaagctgacaggatgttggatatgggttttgagccg
caaataaggagagctttggaaggtgttccccatgaaagacaaattttaatgttttccgct
acatggccaaaagaggtacagtatttagctaaggattatcttggcaaatttgtacaagta
aacgtgggatcaactgatttaactgcaaatcacaacataactcagcatattcatatcgtt
gaacagcatgaaaaaatggataagttgaaacaaataatgcatgatatatctggaagtgga
tttggaaagatattggtgtttaccaatacaaagagatttgtcgatagtcttactctaact
ctgcgtagaaataattggtcagcagttggaattcacggcgataagtcgcaaatgcaaagg
gacattattataaacaaattcagaagtggcgggacaaatatattggttgcaacagatgtt
gccgccagagggctagatgtggatggcataacacatgttataaattacgatttcccgaac
accaccgaagactatattcacaggattggacgtacagggcgatcgcaaaataagggcgta
tctcatacaatcctctcagaggaggatggacgacaagcaaagagtttaatagctgtgttg
aaagaagccaatcaggaaataccagaagatttagagttactggcaagagattataataac
tctaaaaacgttgaaagaagaagcaatccaaagcactaccagaaaggatacaacaataga
agctatactaataactataggagcaacaataattacagaagcaacaataactatagaagc
agtaataagagatggcaatcatatgatagagaagattattattag
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