Colias croceus (clouded yellow): 123694900
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Entry
123694900 CDS
T08651
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123694900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123694900
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123694900
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123694900
Coactivators
SAGA/TFTC/STAGA complex
123694900
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123694900
STAGA complex
123694900
TFTC complex
123694900
SAGA complex
123694900
SLIK complex
123694900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
TFIID_NTD2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_EIPR1
WD_LRWD1
Beta-prop_HPS5
Ge1_WD40
WD40_like
Motif
Other DBs
NCBI-GeneID:
123694900
NCBI-ProteinID:
XP_045496473
LinkDB
All DBs
Position
10:5021070..5035477
Genome browser
AA seq
654 aa
AA seq
DB search
MKRNKNDAVKAVVTSYLERRNYPDIDVFNSNNTVSRSAEEMAVATIVQCESSRANSILFS
CINNDPGQYDTQYTRLFNFIKDLKLEKVKNELLGLLTPLLCHLYLEMLRGGHGGPAQMFL
KRHSVSLPQKDLSYHQPIDGNLPSALYRPNSLEQLFNSLQNGTIDNETPEKDYMNQLLED
IGSVYTLQEIETRPTIAAFRSCKFDICLSQDSLNVLKAYLAKHGHVLLIQVLQTWFHIDV
NGENSKNNAEDEEEDESKENSKNFDLNINEKNDTLDIFSKCNGHAEYQSVDKELRDLQDA
IKSVRDSLVPLKLYKIGAPDTNLICAKTDQYCNVLCGGFSNSEIRLWDLGQNNINRRVNK
NISEFELRCSVPIEPEDIPDNTRQIGTGVPLRGHSGPIQAVSILSREELVLSASHDNTMR
AWRISDYSCASIYRGHNYPIWCLDVSKNGLFIVTGSHDRTAKLWSLDRTFPVRVFIGHMS
DVTCVKFHPNEAYIASGGADRSVRLWSVCDARLVRVLCSHRGPVRALAFSPAGTHLASAG
DDKKIKIWDLAGCTCVHEYRGHYGKVTSLDWSAVGKPSLTNRVSSELSDMTTDNSILCST
GMDGIVKVMWDSQIKNKQLSNQENSTSTYNTKCSYLVDIQVHPDWMVAIGSKKY
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaataaaaatgatgcagttaaagctgttgttacatcctacttagaaaggcga
aattaccctgatattgatgtattcaatagcaataatacagtaagccgaagtgctgaagaa
atggctgtagctaccatagtacaatgtgaatctagccgtgccaactctattttgttttca
tgtatcaataatgacccagggcaatatgacacacaatacaccagattatttaactttata
aaagatttgaaattagaaaaggtaaaaaatgagttgctcggcttattaactccactatta
tgtcatctctatttggaaatgttaagagggggtcatggaggacctgctcaaatgtttctc
aagaggcactcagtgtcacttcctcagaaggacctatcttaccatcagcctatagatgga
aatcttccctctgctttatatagacctaacagcctagaacagctgtttaattccctccaa
aatggcacaatagataatgaaactcctgaaaaagattatatgaatcagttactggaagat
attggatctgtatatactttacaagaaatagagacaaggccaacaattgctgctttcagg
tcttgtaaatttgacatctgcctctcacaagattcactgaatgtactaaaagcatactta
gcaaaacatggccatgtactactaatacaggtcttacagacttggtttcacatagatgtt
aatggagaaaatagtaaaaataatgctgaggatgaagaagaagacgagtcaaaggagaac
tcaaaaaattttgatctcaatataaatgagaaaaatgatacattggacatattttctaaa
tgcaatggacatgcagaatatcaatcagtggataaggaactacgagatcttcaggacgcc
attaaaagtgtacgagattctttggttccacttaaattgtacaaaataggtgcacctgat
accaatttgatttgcgcaaaaacggaccagtattgtaatgtattatgcggtggatttagt
aattccgaaattagattgtgggatcttggacaaaataatattaatagacgtgtcaataaa
aatatttctgagtttgaacttagatgcagtgtaccaattgaacctgaagatattcctgat
aatacaagacaaataggtacaggagtaccgctaagaggacattccgggccaatacaagct
gtcagtatattgtccagagaggaattagttctatcagcttctcatgataatactatgaga
gcttggcgaatatcggactactcgtgtgcttccatatatagaggccacaactatccaatt
tggtgtctggatgtatcaaaaaatggtctatttatagtgacaggttcccatgaccgaaca
gcaaaattatggtctcttgataggacattccctgtaagagtatttatcggccacatgtcg
gatgtcacatgcgtaaagttccacccgaacgaggcgtacatagcgagcggcggcgcggac
cgcagcgtgcggctgtggagcgtgtgcgacgcgcggctcgtgcgcgtgctgtgctcgcac
cgcgggcccgtgcgcgcgctcgccttctcgcccgccggcacgcacctcgccagcgctggt
gatgataaaaaaataaaaatttgggatttagctggatgtacatgtgttcatgaatataga
ggccattatggaaaagtgacatcattagattggtcagcagttgggaaaccttctcttaca
aatagagtatcctcggaactaagcgatatgactacagacaattctattctctgttctact
ggtatggatggcattgtaaaagttatgtgggacagtcaaataaaaaataagcaattatca
aatcaagaaaattcaacatccacctacaatacaaagtgctcctatcttgttgatatacaa
gttcatccagattggatggttgcaataggctcaaaaaaatattaa
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