Colias croceus (clouded yellow): 123695077
Help
Entry
123695077 CDS
T08651
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc04140
Autophagy - animal
ccrc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123695077
04148 Efferocytosis
123695077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccrc04131
]
123695077
Membrane trafficking [BR:
ccrc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123695077
Hops complex
123695077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
123695077
NCBI-ProteinID:
XP_045496736
LinkDB
All DBs
Position
10:complement(3184492..3196328)
Genome browser
AA seq
835 aa
AA seq
DB search
MSALLTADWFQLDSYYRKFDLYNMIWTMDEGLGNMIVCGAAYGGPIAVVRDKKQFVRIMT
TSKPVITIYNGVGNIISKILWNSGVLVHMGWSDGEQLLCIQESGDVLVYDMFGAYQKTFS
MGQEVRDTKVCKAQLFSNPHGIGLAVITTTNRMYLVSNVSDPKLRSLPDLPRANLPISSW
CVLSTGQRSSTQISFLVCRDKEVFKCQLGETRPIPMRPEFKNAYTQVLSIVPSQNGRHVA
LFTDSGFLWIGSSDFKNKYCEIDTGYIKQPKELVWCGSQAIIGHWDDMMCIYGFNGQSIT
YPYDGPFHIIPEMDCVRVISELTHELIQKVPVVVEKIFRINSTAPGSYLVEASKQFQKRS
HRADEYIRLVKPDLSTAVQDCIDAAAFEFNTDVQKMLIRAAQFGKGFLLEPALMEHYVTT
CRWLRVLNAVRDVRVAIPLTFLQVQNLGERILLDRLIWRRLHCLAGHIASYLQLKDGQTR
VLSHWACYKVTQPHLDNESAAREIGEKLRNIPGISYSTIAMKAAEKGRKALAIKILEYET
HSKLQVPLLLSLEEGVIALLKATASGDTDLVYIVLLHLKEKMGKHEFELTIRSLPLAHAL
YIKYCASHNREALRQVYVQEDDFPGQAHTHIRDAIEQTNPGSIEASLISARECYKKGKND
LGASICEDARKLCKQQSSLQETYGESFVGLSLHDTVKKLLNQGEIKLADKLRSEYRMPDR
RYWWLRILTLAEKDDWTELERFSKSKKSPIGYEPFVDACLMHRKNDEALKYLPKCRDDIK
VKYYVKAEFYEEAAQVAFEQKDESALFFVQNKCPIRESTKHARISALLEQLSTRK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctttattaacagcggactggttccagttggattcttactacaggaaatttgac
ctgtacaatatgatatggaccatggatgaaggtttaggtaatatgatcgtctgtggtgca
gcttatggtggtccgatagctgttgttagagataagaaacaatttgtccgaataatgacc
acatccaaaccagttataacaatttacaatggtgttggcaatattatatcaaaaatattg
tggaacagtggtgtgctagttcacatgggttggtctgatggggaacagctactgtgtata
caggagagtggtgatgtacttgtgtatgacatgtttggagcttaccagaagacgtttagc
atgggacaagaagtgagagatacaaaggtgtgtaaagcacaattattctcaaaccctcac
ggcattggcttagccgtaattaccacaaccaaccgaatgtacttagtcagcaatgtttct
gatcctaaactaagatcattgcctgatctaccaagagcaaacttgccaataagttcatgg
tgcgtgctgagtactggccaacggtcttcaacacagataagtttccttgtgtgccgagat
aaagaagtgtttaaatgtcagcttggggaaactagacctatacctatgcgtccagaattt
aaaaatgcatacactcaagtactatcaatagtgccatcacaaaatggccgccatgtcgct
ctgttcacggattccggtttcctgtggataggttcttctgattttaagaacaaatactgt
gaaattgatacaggatacataaaacaaccaaaggaacttgtgtggtgtggttcccaagct
ataatcggtcattgggatgacatgatgtgtatctatgggtttaatggtcaatccataacc
tacccttacgatgggccgttccacatcataccagaaatggactgtgttagagtgatctct
gaattgacgcatgagttgatacagaaagtgcctgttgtggttgagaagatattcaggata
aatagtactgcccctgggtcttatttggtggaggcttctaagcagtttcagaaacgcagc
caccgagcggacgagtacatccgcctagtaaaaccagatctgtccaccgcagtacaagac
tgtatagatgcagcggcttttgaattcaacactgatgttcagaagatgttgatccgagct
gctcagttcggtaaagggttcctattggagccagcgttgatggaacattatgtgaccacg
tgtagatggctgagggtgctcaatgcggtgcgggatgtgagagtggcgatacctttgacg
ttcttgcaagttcaaaacttaggtgaaagaatccttctagacagactgatttggcgcaga
ctgcattgcctcgcgggacacatcgcctcttatttacaattgaaagacggacaaacgaga
gtgctctctcattgggcctgttacaaggtaacacaacctcacctggacaatgaaagtgcg
gcgcgggaaataggtgagaagcttcgaaacattcctggtatatcatattccactattgct
atgaaagctgcagaaaaaggcaggaaagcgcttgctatcaagatattggaatatgaaacg
catagcaaattgcaagtgcctctactcctatcattggaagaaggagtcatagccctgtta
aaagctacagcaagcggggacacagatcttgtgtatattgtcctactacatctcaaggag
aagatgggaaaacatgaatttgagctaacaatccgaagtctaccactcgcgcatgcgcta
tacataaaatactgcgcgagtcacaaccgcgaagcattgcgacaagtgtacgtacaagag
gacgatttcccgggacaagcgcacacgcatatccgggacgctatagaacaaaccaacccg
ggaagtatcgaggcttcgcttatttcggctagggagtgctataagaaggggaaaaacgat
ttgggtgcatcaatctgcgaggacgcacgtaaactttgcaagcaacaatctagtttacaa
gaaacgtatggggaaagttttgttggtttgtccttacatgacacggtgaagaaactgttg
aaccagggagaaattaagctggctgataaattgcgctctgaatatagaatgccggatagg
agatattggtggctcagaatcttaactctggctgaaaaagatgattggacagaactagag
agattctctaaatcgaaaaagtctccaatcggctacgagccatttgtggacgcgtgtctc
atgcacaggaaaaatgatgaagccctcaaataccttccgaagtgtagggacgatattaaa
gtcaaatactacgtaaaagctgagttttacgaagaagcagcgcaagtcgcttttgaacaa
aaggacgaaagtgcacttttcttcgtacagaataaatgcccaattcgagaatccacgaaa
cacgctagaatctctgcgttattagaacaactttcaactaggaaataa
DBGET
integrated database retrieval system
