Colias croceus (clouded yellow): 123695453
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Entry
123695453 CDS
T08651
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123695453
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
123695453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_ECM29
ResIII
HEAT_EZ
HEAT_2
HEAT_EF3_N
TPR_Trm732_C
Cnd1
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
123695453
NCBI-ProteinID:
XP_045497269
LinkDB
All DBs
Position
11:638065..676762
Genome browser
AA seq
1904 aa
AA seq
DB search
MTSRLDRLFVLLEAGSGPATRRAAARQLGEVQKAHPEELHRLLARLMKHLRSPAWETRIA
ATQAVEAILSNVPEWCPSFTGTEIKEEEDSKETEDSNLLKCETFDIERVLEHGAHLMGSE
GHEYDVEEEANNADMKERLAKQRQQLNARLGLDMAATLGVDLTSMCTNEDLCPVKIEVKP
IKNEVVRRPIQELMPLSGKPLSSREMNVAKRKARAAFSKQKSRESEDGPSAPSAPPEPDR
KKVKLEPEDCVFDIGSSAPSRGGGWSSPDTSRWPLEGWCSALQTQLFSGAWEARHGAASA
LRELLRSRIAASAYASKRDIAPATEQQLEDWHQEWLEDMALRLLCVLALDRFGDFVSDQV
VAPVRETCAQTLGVALARLRAARVRAVAARVAALARQPQWEARHGALLAFKYLLAARQEV
AIESGALEHLIAGLDDTAEDVSAVAAGALVPAAGALASRRAAAVPHLAARLWTLLRDQDE
LAAPANCYMALLAALIRLPTAATLLHPIDLVDVLPRLFPYLDHSTSSVRKATLQTLRTLT
KPLVTENGHDGTNTNTEKNNETDTDNNTDADNDTSTDKASGENAVASMNGDNLYLNWTPE
LLQATMRHIYQRILFEHVHEIQEIAIDIWENLLRHASLGAILVAACPMLATWMCLAMQPA
RLPVDPDLLLHTPPKERRPRSTSQTEMDASGEGNMNVGDSEGEGRPQQKWVVGGSDTQPA
ATRDANVTRARVLAANVLGYLSCYLVQPAPGIEYKAEDESPIDCYTKVMVVYLRSGSALQ
RLVAGLVISSWATHTVKHDLFPPGIASHQLDSNKEKDVSKLAPPLLVTTLHTALNQVLYY
DEVALNCNRILQEARDLLAMMKHYKLPVDGEEYNNILRLEQVASMTAATAPLVASMKAKR
VAQNLEQRRAALHAAVAQCSLDQGELNVSVQAAVSGAVACLRVLPDKLNPVIRPLMDSIK
RESSEKLQAAAADTLAHLLATLHGRESSPNNKVLVNLKAFLRCDPEFTPRISLETGEEKA
ERSERGPDSGSGDSGSEAKPDTNTGPALDKYNGILTLREQQRSAERVVPRRGRPPALAAH
DAIDHVLAHEDQTRKMLRIQRRGATMALTSLAKYFGDELPEKLPKLWEFITEPFEKILTD
SELETLEADAAEELISRLQVVEAVCAHLGPAVWQKVSSGARACAALCRAQYTALRHMAAR
ALAAMAAREPHRMMDALVQELIEALSEGSACVRCGAAEALARLVDTLQLQLVPYIVLLLV
PLLGRMSDHNESVRVMATRSFATLIQLMPLDGAAAEPTALSPELRARRAADRAFVDQLFN
PKAIKDYRVPVPVAAELRSYQQAGVNWLRFLYEYKLHGVLCDDMGLGKTLQSIVAVAASH
HERAQARAPALPSLVVCPPTLTGHWVFEVNKFIQTKYLKPLQYVGPPVERERLRSHVRRY
NLIVASYDIVRKDIDFFSSIKWNYCILDEGHVIKNGKTKAFKAIKQLVANHRLILSGTPI
QNNVLELWSLFDFLMPGLLGTERQFTARYSRPILAARDPRAAPHHLQAGALACEALHRQV
LPFLLRRVKEDVLRELPPKITQDYYCELSPLQRSLYEHFSKRHMSQDVPHSRTHVFQALH
YLQNVCNHPKLVLSAEHPELARVQRQLAAQNSSLDDIHHSAKLPALKQLLLDCGIGVSSS
EGGEGSGDATGEVGSVVSQHRALIFCQLKSMLDIVERDLLRAHLPGVTYLRLDGSVPAAM
RHSIVTRFNTDVSIDLLLLTTSVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQ
RRVVNVYRLVTRNTLEEKIMGLQKFKLKTANTVISSENAAMETMGTDQLLDLFQLSSGTE
PATGEEKLPELWDDAQYHEEYDMTSFIRSLRDVRDPGEGVVWKE
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaggttagaccgtctgttcgtgttgctggaggcgggttccgggccggcgacc
cgccgcgcggcggcgcgacaactcggcgaggtccaaaaggcgcaccctgaggaactccac
aggttgctggcccgcctgatgaaacacctgcgctccccggcctgggagacgagaatagcg
gccacacaagcagtggaggcaattctatcgaacgttccggagtggtgcccctccttcacc
ggcacggaaatcaaagaagaagaagacagcaaagagacagaagacagtaacctcttaaaa
tgtgagacgttcgacatcgagcgggtgctggagcacggcgcgcacctcatgggctcggag
ggacacgagtacgatgtggaggaagaggctaataatgcagacatgaaggaacgtctagcg
aaacagcggcagcagttgaacgcccggttaggactcgacatggcggcgacactgggagta
gacctcacttccatgtgcactaatgaggatttgtgccctgtgaagattgaagtcaagccg
attaagaacgaggttgttaggagaccgatccaagagctgatgccgctctctggcaagccg
ctgtcctcccgcgagatgaacgtagcgaaacgcaaagcccgagcggcgttcagcaagcag
aagtcgcgtgagtccgaggacgggccctccgcccccagcgcgccgccggagcccgacagg
aagaaggtcaagctggagcccgaggattgcgtgttcgacataggctccagcgcaccgtcc
cggggtgggggctggtcgtccccggacacatcccgctggccgctcgaaggctggtgcagt
gcgctccaaacccagctgttcagtggcgcctgggaagcgagacacggggctgcgtcagcg
ctgagggagctgctgcgctcgcgcatagcggcttccgcgtacgcgtccaagagggatata
gcgccggctactgagcagcagctagaagactggcaccaagaatggttagaagacatggcg
ctgcgtctgctgtgtgtgctggcgttggacagattcggggattttgtgtccgatcaggtg
gtggcgcccgtgcgcgagacgtgcgcgcagacgctgggcgtggcgctggcccggctccgc
gccgcgcgggtgcgggcggtggccgcgcgggtggccgcgctggcccgccagccgcagtgg
gaggcaaggcacggcgcgctgctggccttcaagtacctgctcgccgcgagacaggaagtg
gcaatcgagagcggtgcgctggaacacctgatcgcggggctggacgatacagctgaagac
gtatctgctgtcgcagcaggtgcattagtaccagctgcaggtgcacttgcttctcgacga
gctgctgctgtaccgcatcttgctgcaaggctgtggacacttctaagggaccaggatgaa
ctggctgctccagcgaactgctatatggcactactagctgcgttgataagactaccaacc
gcggctacgttgctacatcccattgacctggtcgacgtactaccacgtctcttcccctac
ctcgatcactcgaccagttcagttcgtaaagccacactccagacccttcgaaccctcacc
aagcctctagtcacagaaaacggccatgacggcaccaataccaataccgaaaagaacaac
gaaaccgatactgataataataccgatgccgataatgataccagtactgataaagcgagc
ggtgaaaacgctgtggcgagtatgaatggagataatctgtatctgaattggactccagag
ttattgcaagccacaatgcggcatatctatcagaggatattgtttgagcatgtacatgag
atacaggaaattgctattgatatctgggagaacctgctccgacacgcatctttgggggca
atcctagtggcggcctgccccatgctggccacgtggatgtgcctcgcgatgcagcccgcg
cgtttgcctgtagatcctgatctgctgttgcacacgccgcctaaggagcggcgcccgcgc
agcacatctcaaacggaaatggacgcgagcggggaggggaacatgaacgtgggggatagt
gaaggagaggggcgtccacaacaaaagtgggtggtggggggcagcgacacgcagcccgcc
gccacgcgtgacgcgaacgtgacgcgcgcacgcgtgctcgctgcgaacgtgctgggatat
ttgtcgtgttatctagtccagccggcgcccggcatcgaatataaggctgaagacgagagt
cctatagattgctatacaaaggtgatggtagtatacctgcgttcgggcagcgccctccag
cggctagtagcgggattagtgatatcgtcgtgggcgacgcacacggtcaagcacgatctg
ttcccgcctggcattgcgtcgcatcagctggattccaacaaagagaaagatgtatcgaaa
ctggcgcctccgctactagttaccacattgcatactgcgttgaatcaagtcctgtattat
gatgaggtcgcattgaattgcaacaggatattgcaagaagctcgtgatcttttggctatg
atgaaacactacaagttgcccgtggacggcgaggagtataataatatattgaggctggaa
caggtggcatcaatgacagcggcaactgcgcccctagtagcaagtatgaaggcgaaacgc
gtagcacagaacctcgagcaacgccgggcggcactacatgcagctgttgcgcagtgttct
ctcgaccagggggagcttaatgtgtcagttcaagcagcagtcagcggcgccgtagcctgc
ctccgagtgttgccagacaaactaaacccagtaatacggcccctcatggacagcatcaaa
cgagagtctagcgagaaactacaagctgcagcggctgatacactcgcgcatttgctggcc
acactgcacgggagggagtcgagtccgaataacaaagtgctggttaatctgaaggctttc
ttgcgttgcgacccagagttcacgccgcgcatatcgctagagacgggcgaagagaaggcg
gagcgaagcgaacgcggaccggactcggggagcggtgatagcggcagtgaggcgaaaccg
gacaccaatacgggtcctgcgttggacaaatacaacggtatactaactctccgcgagcaa
caacgcagcgcggaacgagtggtgccgcgccggggccggccgcccgcactcgccgcgcac
gacgcgatagaccacgtgctggcgcatgaggatcagacccgaaagatgttaagaatacag
aggcgaggcgcgacaatggcattaactagtctagcgaagtattttggcgatgaattacct
gaaaaattaccgaagttgtgggagtttatcacggaaccctttgagaaaattctcacggat
agcgaattagaaacactagaagcagatgccgccgaagagctgatctctcgtctgcaagta
gtagaagctgtatgtgctcacctcggccctgctgtatggcagaaggtatcgtcaggtgcc
cgagcatgtgcagcgctgtgtcgggcacaatacactgcgctaaggcacatggctgcgcgt
gcgcttgccgctatggctgcaagggaaccgcataggatgatggacgcgctggtgcaagag
ctaatcgaagcactgagtgaaggcagtgcgtgcgtgcggtgcggtgctgcggaagcgctc
gcgcggctcgtggacacgctgcagctgcagctcgtgccgtatatcgtgctgctgctcgtg
ccgctgctcgggcgtatgagcgaccataacgagtcggtccgcgtgatggcgacgcgcagt
ttcgccacactgatccagctgatgccgctggacggcgccgcggccgagcccacagctctg
tcacccgagctgcgtgcgcgccgggcagctgaccgcgcgtttgtggaccagctgttcaac
ccgaaggcgatcaaagattaccgcgtgcccgtgcccgtggctgcggagttgcggagctac
cagcaggcgggcgtgaactggctgcgtttcctgtacgagtacaagctgcacggcgtgctg
tgcgacgacatggggctcggcaagacactgcagtcgatcgtggcggtcgccgcgtcgcac
cacgagcgcgcgcaggcccgcgcgcccgcactgccctcgctcgtcgtgtgcccgcccaca
ctcaccggtcactgggtgttcgaagtgaacaagttcatacagacgaaatatctgaaaccg
ctgcaatacgtcggaccgccggtcgaaagagagcggttacggtcacacgtgcgacgatac
aaccttatcgtcgcgtcgtacgatatcgtgcggaaagatatcgacttcttcagctctatc
aagtggaactactgcatattggatgagggacacgtgatcaagaacgggaagacgaaagcg
tttaaagctattaaacagctagtcgcaaatcataggctgattctgtcggggacgccgata
cagaacaacgtgctcgaactgtggtcgctgttcgacttcctcatgccggggctgctgggc
acggagcggcagttcacggcgcgctactcgcggccgatcctcgccgcgcgcgacccccgc
gccgcgccgcaccacctgcaggccggcgcgctcgcctgcgaggcgctgcaccgccaggtg
ttgccgttccttctgcggcgcgtgaaagaagacgtactccgggaactgccaccgaagata
acgcaggactactactgcgagctcagcccgctgcagcgctcgctgtacgagcacttctcc
aagcggcacatgagtcaagacgtgccgcactccaggacgcacgtcttccaggcgctccac
tacctgcagaacgtgtgcaaccacccgaagctggtgctgagcgcggagcaccccgagctc
gcgcgcgtgcagcgacagctcgccgcgcagaactcctcgctcgatgatatacaccatagc
gctaaactacccgcacttaagcaactcctcctcgactgcggtatcggcgtgtcctccagc
gaggggggcgaaggctccggagacgcgacgggcgaagtgggctccgtcgtgtcccagcac
agagccctaatattctgccagctcaagagcatgcttgatatagtcgagcgtgatttgcta
agggcacatttgcctggagtcacgtatttgcggttagatggttcggtgccagcggccatg
cgccattcgattgtgaccaggttcaatacggatgtgtcgattgatctactgctgttgact
actagtgttggtgggcttggactgaacctgacgggcgcggacacggtggtgttcgtggag
cacgactggaacccgatgcgcgacctgcaggccatggaccgggcacatcgcatcgggcag
cggcgggtcgtcaacgtctaccgcctcgtcacacgcaacacgctcgaggagaagatcatg
gggttacaaaagttcaaactgaaaacggcgaacacggttataagcagcgagaacgcagca
atggagacgatgggcacggaccaactgctcgacctgttccaactcagctcgggaaccgaa
cccgcgaccggcgaggagaagctgccggagctctgggatgacgcacagtaccatgaggag
tatgatatgaccagcttcatacggagtctgagggatgtgagggatcccggggagggggtc
gtgtggaaggagtag
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