Colias croceus (clouded yellow): 123695608
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Entry
123695608 CDS
T08651
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccrc03037
]
123695608
Cilium and associated proteins [BR:
ccrc03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
123695608
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Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
TPR_14
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
TPR_2
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
TPR_GEMI5
WDR90_beta-prop_4th
WD40
Gln_amidase
Motif
Other DBs
NCBI-GeneID:
123695608
NCBI-ProteinID:
XP_045497465
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Position
11:6391577..6399152
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AA seq
1361 aa
AA seq
DB search
MTLYIDTKLNFLDNNIVSTIGSWHSSLPLLAVGSFNQEKGGFVTIFQENGQMLEGCDWPV
LAANQVTALAWHPSRRLLVVGWDGGELYIWLEYSWARLEAPHNAALTTVTFSSGGGRLLA
SDATGSLSGWQSSSGAPLTAFHHQLGDVITHVKFCAPLQTSETSIRGLARAAVAGDENAL
DVLAAWRPRTTARMREGYQPDNHACFAAQDNGVILYIDHAGSCSEVLNAPGVIVFLDIIS
HIYLLVAWESAGALSLSRFLISDDGSLTTDTHVRMSSKNGQSIVLAGNFSVAVITGDKVI
RVWDSENGENDVLPNEAEEIASGETFTSISYCNLSDTLCCGTSLGNLYLWRRDHKNNWKL
LSRTTVKGTVKQVCWGSEGLMNPLLHVNCITNAYILSEQHVCWGYSPKLFMVQKAANEIN
IMGKDNATSTISSTLTIKTFVYKDIYVALSDGNEVQIWMCHKEDVIQFSHIRTFAWKTSA
LFMYNEMLVGIANPHIECYSILGTKLGILPCSEGEGEPIAVTNTNRFIVVATIDGVLKLA
EITKKGLRMPYPPKNCYQIFEDFGEIMRASVNSNGNYICLSIANAGLAPDPKIYLWDVAN
DKISNTLLSDSRTTPYQSVPITILWDNFDSRLVAVHMRSVDFDRIHLFFCHEGVLHEYKN
WCPASENYLSDFIMCSIHSPYVVILSHQNMHKILLKEFEEPSDHDSNKIKEVLNFLFYMC
TGFLEKAVIIGTNINGPKSSVIWDSLAKECVLRKRADVGAVCLSKMGNIKGAMMMRKVMQ
DDNMDETSKVGVLAVNLGMIDEAHKLFRESQRLDLVTRLISAREGGLNEIINEETLGENI
LLVKSAQHRLAKIMWMNGDTSESLKLFEKAGTLVPHVPRMLIAQGQAPMLAQYVSTSKDA
GLITWWGHYLESIGDLDGALEAYARANDYGEQTRLLCHMNRLEEAEKLSQKNSSSLYQMA
RYLEANTNETEKVVKMYIKCGAIASAIRIAAETSSWNLVWRAGSSSTKHALYAASILENA
GQTEQAIALYQKSGKPHMALKLAMSSGDTNAIVAAVESLGDRVDPELACTLATHLKKSDH
HPQAAALLATAGKYEEALEIVEESSAPLSEELSERLAAPAGTTGRDVLLRRLADVLGARG
LYHQAAKRLANIGDKAGAMRWLIRSGDAERIATFAAASRDRTAQLMAADYLRRRAPWRTR
PDLTRHILHFYTRAKAYGKLASFYAECAKMEIDEYENYEKGLDALKEATRCIAKSTDPEM
NAQLIALQEQSALVKRFIDVKKSLQGSDVNEGVTSGQQLIRAVSGRPGLINQEKILKMLL
LHAPSHPEVERLEQQLKTLQIQPQDENSRSESPDQSVEEVI
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgactctgtacattgatacaaaattgaattttttagataataacatcgtttcgactatc
ggatcatggcacagctctttaccattgttagcggtcggttccttcaatcaagaaaaagga
ggctttgtcacaatcttccaagaaaatggtcagatgctcgaaggatgtgattggccagtc
cttgcagctaaccaagtgactgctttagcatggcatccatccagacgccttcttgtagtg
ggctgggatggtggagaactttacatctggctggaatattcttgggcacgtttagaagca
ccccacaatgctgctttaactacagttacattcagttctggtggaggtcgactgttagcg
tcagacgcgactggctcattatctggttggcagtcaagttcaggcgcccctttgactgct
ttccaccatcagttaggagatgtcattacgcatgtaaagttttgtgcaccgcttcaaacg
tctgaaacttctataagaggtctagcacgagcagcagtagctggcgatgaaaacgcattg
gatgttttggctgcgtggagacctcgtacaactgccagaatgagagaaggataccagcct
gataatcatgcttgttttgctgctcaagataatggtgtaattttgtatattgaccatgcg
ggatcttgttcagaagttctgaatgcaccaggagtaattgtatttttggatataattagt
cacatttatcttcttgtagcatgggaatccgctggagcactcagtttatccagattcctt
atatcggatgatggatcacttacaacagatactcatgtaagaatgtcttcaaagaatgga
caaagtatagttttagctggaaatttttcagttgcagttataactggtgataaagttata
agagtatgggacagtgaaaatggcgaaaatgatgttttacctaatgaggctgaagaaatt
gcctctggagaaacatttacaagtataagttattgtaatttaagcgatacactatgttgc
ggaacttcgttaggcaatctatacctttggagacgtgatcataagaataattggaaatta
ttaagcagaactacagttaaaggaacagtaaaacaagtttgttggggatctgagggttta
atgaacccacttctacatgtaaactgtattacaaatgcatatattttgtctgagcaacat
gtttgttggggatattctccaaaattatttatggttcaaaaagcagctaatgagattaat
attatgggcaaggataacgcaacttctactataagttctactcttactattaaaaccttt
gtatataaagacatctatgtagctttgagtgatgggaatgaagttcaaatatggatgtgc
cacaaagaggatgttatacaattttcacatatccgaacttttgcgtggaagactagtgcc
ctttttatgtacaatgaaatgttggttggaatagcaaatcctcatatagaatgttattca
atattaggaactaaattaggcattctgccatgttctgaaggagagggagaacccattgct
gttacaaatacaaatagatttattgtagttgcaaccattgatggtgttctaaagctagct
gaaataacaaagaaaggcttgagaatgccctatccacctaaaaattgttatcaaatattt
gaagacttcggagaaatcatgagagcatctgtaaattcaaatggaaattacatttgtttg
agtatagctaatgcaggtttagcgccagatcctaaaatatatctatgggatgttgctaac
gataaaataagtaatactttgctctctgattccagaacaactccatatcaaagtgtacct
attacaattctgtgggacaatttcgattctcgtttagttgcagttcatatgcgctctgtt
gactttgatcgaattcatttatttttctgtcatgaaggcgtgcttcatgaatacaagaat
tggtgtccagcttcagaaaattatctatctgattttatcatgtgctcgatacattcacca
tatgttgtaattttatctcatcaaaatatgcataagattctattaaaggaattcgaagaa
ccttcagatcatgatagcaacaaaataaaggaggttttaaattttctgttttatatgtgt
acaggtttcttagaaaaagctgttataatagggactaatataaatggacctaaaagttca
gttatatgggatagtttagctaaagaatgcgtacttcgcaaaagagccgatgtcggtgca
gtttgtctaagtaaaatggggaatataaaaggagcaatgatgatgcgtaaagttatgcag
gatgataatatggatgaaacatccaaagttggagtacttgctgttaatttaggcatgatc
gatgaagctcataaattattccgagagagtcaaagacttgaccttgttacacggcttata
tctgctcgggaaggtggattgaatgaaataatcaatgaggagaccttaggtgaaaatata
cttttggtaaaaagtgctcagcatagattagcaaagattatgtggatgaatggagataca
agtgagtctcttaaattattcgaaaaagcaggtactcttgtcccccatgttcctagaatg
cttatagcgcagggccaggcgccaatgctggcccagtatgtttcaacatccaaagatgct
ggtttgataacgtggtggggtcactatcttgaaagtataggtgatctggatggggcgttg
gaagcatacgctcgggcaaatgattatggtgaacaaacaagattgttatgtcatatgaat
agacttgaagaagctgaaaagctttctcagaaaaattcttcatcactgtatcaaatggct
cgctacctggaagcaaatacgaatgaaactgaaaaagtcgtaaagatgtatataaaatgt
ggtgctatcgcatcagctattagaattgccgccgaaacaagttcatggaatttggtttgg
agagctggatcatcatcaacgaaacatgcactttacgcagcgtccattttagaaaatgca
ggccagacagagcaagccatagctttatatcaaaagtcgggaaaaccccatatggcatta
aaactagcaatgagttccggagacacgaatgcgattgttgccgctgtagaatcattggga
gatcgagttgacccagaattagcgtgcacactcgctacgcatcttaagaaaagtgatcac
cacccacaagcagcggctttgctagctactgctggaaaatatgaggaggcgttagaaata
gtagaagaatcatccgcaccgctatctgaagagctgagtgagcgtctcgcagctccagcg
ggtaccactggtcgtgatgtgttgttgcgtcgtttagctgacgttcttggcgcaaggggg
ctgtaccatcaagctgctaaacgactggctaatataggagacaaggcgggtgcgatgcgt
tggttgattcgatcaggggacgcggaacgtatcgcgacatttgcagccgccagccgcgat
agaactgcgcagttgatggcggctgactacttgcggcggagggctccgtggcggacacga
ccagatctcactagacacatcctgcacttctataccagagcaaaagcgtatgggaaactc
gcttcgttttacgcggaatgcgctaagatggaaattgacgagtatgagaattatgaaaaa
ggattggatgcgcttaaagaagcaacgcgatgtatagcaaagtccacggatcctgaaatg
aatgctcaattaatagctttacaagaacagagtgctctagtaaagcggttcattgatgtg
aaaaaatccttgcaaggtagcgacgttaatgaaggtgtaacaagtggacaacaattaata
cgagctgttagtggaagacctggactgataaatcaagagaaaatattgaaaatgctactt
ttgcatgcaccttctcacccagaagttgaaagactggaacagcaactaaaaacgttacaa
atacagccacaagacgagaactcgagatcagagtctcctgatcaaagtgtcgaagaagtt
atttaa
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integrated database retrieval system
