Colias croceus (clouded yellow): 123695956
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Entry
123695956 CDS
T08651
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03013
Nucleocytoplasmic transport
ccrc03015
mRNA surveillance pathway
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123695956
09122 Translation
03013 Nucleocytoplasmic transport
123695956
03015 mRNA surveillance pathway
123695956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123695956
03041 Spliceosome [BR:
ccrc03041
]
123695956
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123695956
TREX complex
123695956
Spliceosome [BR:
ccrc03041
]
Complex C
Other components
EJC/TREX
123695956
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123695956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
Motif
Other DBs
NCBI-GeneID:
123695956
NCBI-ProteinID:
XP_045497863
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All DBs
Position
12:6943205..6945241
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AA seq
260 aa
AA seq
DB search
MVDKIDMALDDIIKASKKGGRGGGAGRKFDTRKPNRGGGGGFRNNRAGGVMRGRNRGGVS
KSTNYSREKLFQGDVNSTWKHDMFNEFTDRKMQRGAPITTGPTKLLVSNLDFGVSDSDIQ
ELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGVPLDGRAMNIQLATS
EISTIRTENRGRPVSSGGGPPMRRNSNRGGGGGGNVRAANNARRGSGGRGGRGGGARGKR
PVPTAEQLDAELDAYVKEIK
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggttgacaaaattgatatggcattagatgatataataaaagccagtaaaaagggagga
agaggcggcggagctggaagaaaatttgataccagaaaaccaaaccggggaggtggtgga
ggctttcgtaataatcgtgctggaggtgtaatgcgtggtagaaaccgcggcggagtatcc
aaatcaacaaattattcaagggaaaaactatttcagggtgatgttaacagcacttggaaa
catgacatgttcaatgaattcactgacaggaagatgcaaagaggtgcacccattacaact
gggccaactaaactccttgtttccaatttagattttggagtttcagattctgatattcaa
gaattattctcagagtttggaattttaaaaagtgcagctgtgcactatgatagatcaggc
agatctttaggtacagcagatgtagttttcgaaagaagggcagatgctttaaaagcaatg
aaacaatacaatggtgttcctcttgatggccgtgcaatgaatatccaattagccacatca
gaaatcagcacaataaggacagaaaatagaggtagaccagtcagtagtggcggtggacca
ccaatgagaaggaattccaataggggtggtggcggcggtggcaatgtaagagctgcaaac
aatgcacggcgaggtagtggaggtcgcggcggccgcggcggtggcgcacgtggcaaacga
cctgtgcccaccgcagagcaacttgatgcagaactagatgcttatgttaaagaaatcaag
tga
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