KEGG   Colias croceus (clouded yellow): 123695956
Entry
123695956         CDS       T08651                                 
Name
(RefSeq) THO complex subunit 4 isoform X1
  KO
K12881  THO complex subunit 4
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03013  Nucleocytoplasmic transport
ccrc03015  mRNA surveillance pathway
ccrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123695956
  09122 Translation
   03013 Nucleocytoplasmic transport
    123695956
   03015 mRNA surveillance pathway
    123695956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccrc03019]
    123695956
   03041 Spliceosome [BR:ccrc03041]
    123695956
Messenger RNA biogenesis [BR:ccrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     123695956
    TREX complex
     123695956
Spliceosome [BR:ccrc03041]
 Complex C
  Other components
   EJC/TREX
    123695956
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123695956
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz
Other DBs
NCBI-GeneID: 123695956
NCBI-ProteinID: XP_045497863
LinkDB
Position
12:6943205..6945241
AA seq 260 aa
MVDKIDMALDDIIKASKKGGRGGGAGRKFDTRKPNRGGGGGFRNNRAGGVMRGRNRGGVS
KSTNYSREKLFQGDVNSTWKHDMFNEFTDRKMQRGAPITTGPTKLLVSNLDFGVSDSDIQ
ELFSEFGILKSAAVHYDRSGRSLGTADVVFERRADALKAMKQYNGVPLDGRAMNIQLATS
EISTIRTENRGRPVSSGGGPPMRRNSNRGGGGGGNVRAANNARRGSGGRGGRGGGARGKR
PVPTAEQLDAELDAYVKEIK
NT seq 783 nt   +upstreamnt  +downstreamnt
atggttgacaaaattgatatggcattagatgatataataaaagccagtaaaaagggagga
agaggcggcggagctggaagaaaatttgataccagaaaaccaaaccggggaggtggtgga
ggctttcgtaataatcgtgctggaggtgtaatgcgtggtagaaaccgcggcggagtatcc
aaatcaacaaattattcaagggaaaaactatttcagggtgatgttaacagcacttggaaa
catgacatgttcaatgaattcactgacaggaagatgcaaagaggtgcacccattacaact
gggccaactaaactccttgtttccaatttagattttggagtttcagattctgatattcaa
gaattattctcagagtttggaattttaaaaagtgcagctgtgcactatgatagatcaggc
agatctttaggtacagcagatgtagttttcgaaagaagggcagatgctttaaaagcaatg
aaacaatacaatggtgttcctcttgatggccgtgcaatgaatatccaattagccacatca
gaaatcagcacaataaggacagaaaatagaggtagaccagtcagtagtggcggtggacca
ccaatgagaaggaattccaataggggtggtggcggcggtggcaatgtaagagctgcaaac
aatgcacggcgaggtagtggaggtcgcggcggccgcggcggtggcgcacgtggcaaacga
cctgtgcccaccgcagagcaacttgatgcagaactagatgcttatgttaaagaaatcaag
tga

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