Colias croceus (clouded yellow): 123696043
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Entry
123696043 CDS
T08651
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03022
Basal transcription factors
ccrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123696043
09124 Replication and repair
03420 Nucleotide excision repair
123696043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123696043
03400 DNA repair and recombination proteins [BR:
ccrc03400
]
123696043
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123696043
DNA repair and recombination proteins [BR:
ccrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123696043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
123696043
NCBI-ProteinID:
XP_045497999
LinkDB
All DBs
Position
12:complement(3662083..3665696)
Genome browser
AA seq
403 aa
AA seq
DB search
MADDEQDPKEYRWETGYEKTWEAIKEDEDGLVEGLVAEFAQKAARKAATTRRGPVRLGMM
RHLLVAIDCSEAMSSQDLKPTRFLCTLKLLEKFVEEFFDQNPLSQLGLIAMKNKRAEKIT
ELSGNIRKHVKTVQGLSNLALTGEPSLQNTLELAGRVLKPLPGHASRELLVLFASLTTCD
PGDITTTIQNLKNDGIRCSVIGLAAEVRICKKLCQDTGGEYGVVLDDVHYRSLLLEHTSP
PPRARALDAGLVKMGFPHTAPPATTSDGASNDPPITVCMCHLEEGEGVGGEGHLCPQCRS
KYCSLPAQCRTCGLTLASAPHLARSYHHLFPVDPFEELKNEGQSQFCFACVRSFTDVDKQ
IYRCTRCMEFYCWECESMIASTLHVCPGCASRPHLYQRLPESS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatgaacaggatcctaaagaatatcgatgggaaacgggttatgaaaagaca
tgggaagcaataaaagaagatgaagatggcttggtggaaggtcttgtggcggagtttgct
caaaaagcggctcggaaagcagcaaccactcgccgtggcccggtacgccttggcatgatg
aggcatctacttgtagccatcgattgttctgaagctatgagttcacaggatcttaagcct
acaaggtttttatgtacattaaagttattggagaaatttgtagaagaattctttgatcag
aatcctcttagccaattgggattgattgcaatgaaaaacaaaagagctgaaaagataact
gagctctcaggaaatattagaaaacatgtcaaaactgttcaaggcttatccaacttggct
ttaacaggagagccatcactccaaaacactttggaactggctggcagagttctgaagcct
ctccctggtcatgcgtccagagaattgcttgttctatttgcttctctaactacatgtgac
cctggtgatattactacaactattcagaacttgaaaaatgatggaattagatgttcagtt
attggattagctgctgaagtaagaatatgtaagaagttatgtcaagatacaggtggggaa
tatggggtagtattggatgatgttcactaccgctcgctactcttagaacatacctcgcca
ccgccgcgagcccgtgcgttggatgctggtttagtaaagatgggttttccacataccgca
ccaccagcaaccacttctgatggtgcgtctaacgacccgcccatcactgtttgtatgtgt
cacttagaggagggcgagggtgtgggcggcgaggggcacctgtgtccgcagtgccgcagc
aagtactgctcgctgcccgcgcagtgccgcacctgtgggctcacgctcgcctccgcgccg
catctcgctagatcataccatcacttattcccggtagacccatttgaagaattaaaaaat
gaagggcaaagtcagttttgctttgcctgtgtgagatcatttaccgatgttgataagcag
atatatcgctgcacccgttgtatggagttttattgctgggaatgcgagagtatgatagca
tccaccttgcacgtatgtccgggatgcgcgtctcgaccgcacttatatcagcgattgccg
gaatcctcgtga
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