Colias croceus (clouded yellow): 123696115
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Entry
123696115 CDS
T08651
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123696115
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123696115
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123696115
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
123696115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
Spt6_S1
HHH_9
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
123696115
NCBI-ProteinID:
XP_045498093
LinkDB
All DBs
Position
12:7925008..7939281
Genome browser
AA seq
1689 aa
AA seq
DB search
MADFLESEAEESELDSEDEQPAERKKPKRKAAVQSDDEDEEEEDDEERLREELKDLIDDA
PIEESGSDGEDSDASVGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLE
DDDSDNEGADDPDLEREVIAEKLFVGGSDEEDENRSESAAPREVEYDDENEDMESDADDF
IVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGEEDYEDEEDEDLDEY
IEDEEEEGERRRTKKGKPKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDVPERMQIRD
VPITAVEEGSTELEDEAEWIYKQAFLKPPVSKADAQEARDRSRRGSSTVVKIRQALDFMR
NQTLEVPFIAFYRKEYVQPELSINDLWKVYKYDAKWCQLKQRKENLLKLLENMREFQLDK
VMADPDAPIPDTMRLIKDEDIERLKNVQTPEELRDVHTHFLLYYSHDLPEMQKVQRAKEK
KRQIEEKKKQAREEAEKNGEDPDEAAAAVEAALPDEEETTEVKYAVRSGPYELCRKAGLE
PLVRKFGLSAEQFAENVRDNYQRHEVEQPPVPPLDAAQEYTGPDGSAAEAVRRAVYMCGV
QLAREPLLRATLRDALRERATLTVRPTAKGLKMIDETHGCCSLKYLKNKPVRDLTGDQFL
KLSMAAEDKLLEIRISENIEGNTSSNYLEELKQLYQKDEFAATVQAWNDLRAEAVTLALT
KIVMPELRRELHAQLLQESKDYVLKCCRRRLYDWLKVAPYESRISEDDDDEWDASNGVRV
VSIAYVPERSQCAFACAVVGGGEVADHLRLPHLLCRRNAWDPIERRNKEGDLTALRRFIL
RKKPHVIVIGGESREALNIKADVSECIQQLIEDEQFPRIPIEIADNHVSKIYSNSIRGKN
DFREYPDILRQAICQARLLQDPLMEISQLCGPDEEILCLRYHTLQDQLNKEDLLEGIELE
FVNRVNEVGVDVNEAVLTGRGTELLQFVCGLGPRKAQALIKLFKQTNQKLENRTQLVTVC
HMGPKVFINCSGFIKIDTNSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDEDA
NPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNSRYKDLRVPYRS
PTPEELFDILTKESPETFYVGKMVLATVVGITHRKPQREMLDQANPVRNDETGLWECPFC
HKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVTDPTERVRIGQ
TIHCRVLKIDVERFSVDCSSKSSDLLDKNNEWRPSKDPYYDQESEEKDIRKDKESKQTKE
RMQYVKRVIVHPSFRNISFVEAEKLMEKMAQGEVIVRPSSKGSDHLTVTWKVAEGICQHI
DVREEGKENAFSLGRSLWIQGSEFEDLDEIIARYVTPMAGHARDLIAYKYYKPLGGMRDK
AEELLKEEKSKNANKIHYVISAAKNHPGRFLLSYLPRNKCTHEYVSVTPDGYKFRQRMFD
SLGSLLKWFKEHFRDPPPSGTPAQRTPALRTPHGGMTSAMYHTPAAHTPAFHTPAHTPGP
AYINTPYTPSAQTPYMTPFATTPRQPDFLTPVVPRHKPAPAYTEPSDWQKAAEDWVRHRT
RDTPGTPGTPGTPRAGRTPRGDARATPRDARAHGSGRSSRAHSARSTPHTNTSPRSMSLG
DATPLYDEN
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttcctagaatcagaggcagaggagagcgagttggattctgaggatgaacaa
ccagccgaacgcaaaaaaccaaagcgtaaagctgcagtacaaagtgacgacgaagacgaa
gaagaagaagatgatgaagagcgtctcagagaggaactgaaggatcttatagatgatgct
cctattgaagagtcaggcagtgatggtgaagactcagatgcaagtgtagggcctaagaaa
agaaagaaaagtgatgatgaattagatgatagacttgaagatgaagattacgatttaatt
gaagagaatttgggtgtgaaagttgctagaaataaattcaaacgtctcagacgtctagaa
gatgatgacagtgacaatgagggtgcagatgaccctgatttggagagagaagttattgct
gaaaaactctttgttggaggatcagatgaggaggatgaaaaccgctcagaatcagccgca
ccaagagaggtggaatatgatgatgaaaatgaggatatggagtcagacgctgatgacttc
attgttgatgatgatggtagacccattgcagaacggaagaagaagcggaagcctatattt
actgatgcatcactgcaagaaggtcaagatatatttggagtggactttgactatgatgaa
tttgaaaaatatggtgaagaggattatgaggatgaggaggacgaagatttggatgaatat
attgaagatgaagaagaagaaggtgaaagacgtagaactaaaaagggaaaaccaaaacgg
ccaagcaagaagtctatatttgagatttatgagccaagtgaattgaagagaagtcatttc
actgatttggacaatgagattcgtaaaacagacgtccctgagcgtatgcaaatacgcgac
gtaccgataacagcagtggaggaaggtagcacggagttggaggatgaagcggaatggatt
tataagcaggcgttcttgaaaccacccgtgtcgaaagcggatgcgcaagaggctagggat
aggtcgaggcgaggttcaagtactgtagtgaagattcggcaagcgttggacttcatgcga
aaccagacattggaagtaccgttcatagcgttttatagaaaggagtatgttcaaccagag
ttgagcattaatgatctgtggaaggtgtataaatatgatgctaagtggtgtcaactgaaa
cagcgcaaggagaatctgctaaaactgttggagaacatgcgagagtttcagctcgataaa
gttatggcggacccggatgcgcccataccagataccatgagactcattaaagatgaagat
attgaaagactgaaaaacgtgcaaacaccggaggaactgcgcgacgtgcacacacacttc
ctgttgtactattcgcacgacctgcccgagatgcagaaagtgcaacgcgcgaaagagaag
aagagacaaattgaggagaagaagaaacaagcgcgcgaagaagccgagaagaacggcgag
gatccagacgaagcagccgcagcagtagaagctgcgctccccgacgaggaggagacgacg
gaggtgaagtacgcggtgcgatccggcccgtacgagctgtgcaggaaggcggggctcgag
ccgctggtgcgcaagttcggcctgtcggcggagcagttcgcggagaacgtgcgcgacaac
taccagcggcacgaggtggagcagccgcccgtgccgccgctcgacgccgcgcaggaatat
acgggccccgacgggtcggccgcggaagccgtgcggcgcgcggtgtacatgtgcggcgtg
cagctggcccgcgagccgctgctgcgcgccacgctgcgggacgcgctgcgcgagcgggcc
acgctcaccgtgcgccccaccgccaaggggctcaagatgatcgacgagacgcatggctgc
tgcagtttgaaatatcttaaaaataagccagttagagacttgactggagatcaatttttg
aaactaagtatggctgcagaggataaattattggagatcagaattagtgaaaatattgaa
ggcaatactagttccaattacttggaagaactaaaacagctgtatcaaaaggacgaattc
gcggccactgtacaagcgtggaacgacctccgtgcggaagcggtgacgctggccttaaca
aagatcgttatgccagaattgcggcgtgaattacacgctcaattgttacaggagtctaag
gattatgtgctcaagtgctgtcgacgacgtctctatgattggttgaaagttgctccgtat
gaatcgcgtatttcagaagatgatgatgacgaatgggatgcgtctaatggtgtgcgcgtg
gtgtctatagcgtacgtcccggagcggtcacaatgcgcgttcgcgtgcgcagtggtcggc
ggcggcgaagtggcggaccacctgcgcctgccgcacctgctgtgccgccgcaacgcgtgg
gaccccatcgagcgccgcaacaaggagggcgacctcaccgcgctgcgcagatttattcta
cgcaaaaaacctcacgtaattgtaattggcggtgagtctcgagaggcgttgaatattaaa
gctgacgtgtccgaatgcattcaacagttgattgaagacgaacagttccctagaattccc
atagaaattgctgataatcacgtcagcaaaatttacagcaacagcatacgaggaaagaat
gacttcagagaatatcccgacatactcagacaagcgatatgccaagcgcgcttattgcaa
gatcctctcatggaaatttcacagctctgtggaccagacgaggaaattctttgtctaaga
taccatacgctacaagaccaactgaataaagaggatctacttgaaggaatcgaattagaa
tttgtgaacagggttaatgaagtcggtgtggatgtcaacgaagcagtgttaactggtcga
ggaacggaacttctacagtttgtttgtggtcttggaccaagaaaagcacaagcgctcatc
aaactgttcaagcaaacgaatcaaaagctggaaaatcgaacgcaattagtcacagtatgt
cacatgggacctaaagtgttcatcaattgttcagggtttatcaaaatagacacgaatagt
cttggcgacagtacggaagcgtatatagaagtgctagacggttctagagtgcatccagaa
acgtatgagtgggcgagaaaaatggcggtggacgctttggaatatgaggatgaagatgca
aatcctgctggagcgttggaagaaattctcgaagcacctgaaagattaaaagatctagat
ctggatgctttcgctgaagaattggaacgacaaggtttcggcaataagagcataacgtta
tacgatattcgtgcagaattgaactctaggtataaggatcttagggttccatatcgatcg
ccgacacctgaagaattgtttgatattcttacgaaggaatcacctgaaactttctatgta
ggcaaaatggtgttagccactgttgttggaataactcataggaaaccacaaagagaaatg
ctggatcaggccaaccctgtaagaaatgatgagactggtctgtgggagtgtcccttctgt
cacaagaacgatttccctgaattatctgaggtatggaaccatttcgacgcgggcgcgtgt
ccgggccaagcgacgggcgtccggatccgactcgacaacgggctctccggctacatacac
atcaagaacctgtccgaccgacacgtgacggatccgacggagcgcgtgcgcatcggacag
acgatacactgtagagtgctcaagatagacgtggaacggttctccgtggactgctcgtcg
aagtcctccgatctgttggataagaataatgagtggagaccgtcaaaagatccgtactac
gaccaagaatcagaagaaaaggacatacggaaggacaaagagagcaagcagaccaaggag
cggatgcagtatgtgaagcgagttatagtgcacccttcattcaggaatatttcttttgtg
gaggctgagaaactgatggagaagatggcgcaaggagaggtcattgttaggccgagtagt
aagggttcagatcatctcacggtgacttggaaagttgcggaaggtatatgccaacacatt
gatgttcgagaggagggaaaagaaaacgcattctcgttgggtcgcagtctttggatacaa
gggtcggaatttgaagatttggatgaaattatagcacgatacgtgactccgatggcggga
cacgcgcgagatctcattgcgtacaaatattacaagcccctcggcggcatgagagacaag
gctgaagagttgctcaaggaggaaaaatctaagaacgccaataagattcattacgtcatt
tcggcggctaaaaatcacccgggcagattcttactatcgtatctgcccagaaacaagtgc
acgcacgagtacgtgtcggtaacgccggacggttacaaattcaggcagcgaatgttcgac
tcgctgggcagcttgctcaagtggttcaaggagcacttccgcgacccgccgccgagcggc
acgcccgcgcagcggacgcccgcgctgcgcacgccgcacggcggcatgacgtccgccatg
taccacacgccggccgcgcacacgcccgccttccacacgcccgcgcacacgcccggcccc
gcctacatcaacacgccgtacacgccctccgcgcagacgccgtacatgacgccgttcgcg
accacgccgcgccagcccgacttcctgacgcccgtggtgccgcgccacaagccggcaccc
gcgtacacggagccgtccgactggcagaaggcggccgaggactgggtgcggcaccgcacg
cgcgacacgccgggcacgccgggcacgccgggcacgccgcgcgcgggccgcacgccgcgg
ggcgacgcgcgcgccacgccgcgggacgcgcgcgcgcacggctcgggccgctcgtcgcgc
gcgcactcggcgcgctccacgccgcacaccaacacgtcgccgcgctccatgtcgctcggg
gacgccacgccgctctacgacgagaactag
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