KEGG   Colias croceus (clouded yellow): 123696281
Entry
123696281         CDS       T08651                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit Rpb4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03020  RNA polymerase
ccrc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123696281
  09124 Replication and repair
   03420 Nucleotide excision repair
    123696281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccrc03021]
    123696281
   03400 DNA repair and recombination proteins [BR:ccrc03400]
    123696281
Transcription machinery [BR:ccrc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123696281
DNA repair and recombination proteins [BR:ccrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123696281
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 123696281
NCBI-ProteinID: XP_045498318
LinkDB
Position
12:6363182..6379138
AA seq 138 aa
MAGPIQDVIEEDAADLQFPKEFENAETLLISEVDMLLEHRKAQNESAEEEQEFSELFMKT
LTYTNMFKKFKNKETITAVRNLLQSKKLHKFEVASLANLCPETPEEAKALIPSLEGRFED
EELRILLDDIQTKRSIQY
NT seq 417 nt   +upstreamnt  +downstreamnt
atggccggacctatacaagacgtaatcgaggaagatgcagccgatttacagtttcccaaa
gaatttgaaaatgccgaaactctgcttatatctgaagtggacatgctattagaacacagg
aaagcgcaaaatgagtcggctgaagaagagcaagaattttcagaactgtttatgaaaact
ttaacttatacaaatatgtttaaaaaatttaaaaataaagaaacaatcactgccgtacga
aatttgctacaatctaagaaattacacaagtttgaggtagctagtttggctaatctctgt
cctgagactccagaggaagcaaaggcgctcataccatctctagaagggagatttgaagat
gaggagttaagaatcttattagacgacatacaaacaaagcgcagtattcaatattaa

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