Colias croceus (clouded yellow): 123696424
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Entry
123696424 CDS
T08651
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccrc03016
]
123696424
Transfer RNA biogenesis [BR:
ccrc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
123696424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
PrmA
Cons_hypoth95
Methyltransf_4
Methyltransf_15
Methyltransf_11
PCMT
Ubie_methyltran
Methyltransf_32
TRM5-TYW2_MTfase
AviRa
Methyltransf_12
FtsJ
TRM
Motif
Other DBs
NCBI-GeneID:
123696424
NCBI-ProteinID:
XP_045498539
LinkDB
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Position
12:complement(7910345..7915199)
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AA seq
595 aa
AA seq
DB search
MSEENSNNEEYAYLDRGGFSSEKFKIELRDLPKFYGIAELKKLMNQKLGLSVSKIKRPKV
GNHWLYACFQNDEERNKAIAALNGYQWKGKTLIAEAAKPAPDPLVKRKQEGTDNVKRQKT
NDDQEKKSQEERLRDAVTPYWNIPYDEQLKLKEKDMKRILMKFDNEVWKIDKQKRRKIEA
NRKIYDGLSFELKPIQKSPITQGYRNKCEFTVGMDEETKKPTVGFRLGCYWAGSVAVAPV
ESVNHIPDNMKKIAVVFQEFVRQSNLAPYSPVDYTGHWKCLTVRQSSHNNDIMLIIAIDP
QALSNEELDKLKQELIEYFQLEESTACGVKSVYIHLISKRRVGEEVPKPIHLLGSTHITD
TILGLQFMISPEAFFQINTAGAEILYQSAIDMSQVNDKSTVIDVCCGTGTIGLCFAKHCA
EVLGLELIEKAVEDAKANAKLNNIENCNFYSGKAEYTLPAVLARAAGDDIIAIVDPPRAG
LHMTAITTLRNNKRVKRLIYMSCSPASVTKNFVDLTRASSKTLHGAPFSPVCALPVDMFP
HTKHVELIVLFEREQEPTRDVEKPAEKIAEEETVQESKEDGAIIENNVNNEDVES
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagaaaatagcaataatgaggaatatgcatatttggaccgaggaggcttttca
tcagagaaattcaaaatagagttacgcgaccttccaaagttctatgggatagcggagtta
aagaagttaatgaatcagaaactaggattaagtgtaagcaagattaaaagaccgaaagtt
ggtaatcactggctgtatgcgtgttttcaaaacgatgaggagcgtaataaagctatcgca
gcattaaatggatatcagtggaaaggtaaaacgttgatagccgaagcagctaaacctgca
cctgatccactagttaaaagaaaacaagaaggcacagataatgttaaaaggcagaaaaca
aatgatgatcaagaaaaaaaaagccaagaggaaagattacgggatgctgttactccatac
tggaatataccatatgatgaacagctcaaactcaaagaaaaggatatgaagcgtatacta
atgaagtttgataatgaagtgtggaagatagataaacagaagcgccgtaaaatagaggca
aatagaaagatatatgacggtttaagctttgaactgaagcccatacagaagtcaccaatc
acacaggggtataggaataaatgtgagttcacagtgggtatggatgaagaaacaaagaaa
ccaacagttggctttagattgggatgttactgggctgggtcggtggctgtagcgccagtg
gaaagtgtgaatcacataccggataacatgaaaaagattgctgttgtatttcaagagttt
gtaaggcaatcgaacctagcgccatatagtccagtagattacacaggacattggaaatgt
cttactgtgcggcaatcatcacacaataatgacatcatgctcatcattgctatagatcca
caggcattatctaatgaagaattagacaaattaaaacaagaattgattgagtatttccaa
ttagaagaatcaacagcgtgtggagttaaatcagtatacatacatctcatatctaaaagg
agggtaggagaagaagtacctaaaccaatacatctgttgggttcaacacacattacagat
acaattctagggctacagtttatgatatctcctgaggcgtttttccagataaacacagca
ggtgctgagattctttaccagagtgcaattgacatgagccaagtgaatgacaagtcgaca
gtcatagatgtctgctgtggtaccggcacaattggattatgtttcgctaagcattgcgct
gaagtattaggccttgagctgattgaaaaagccgtcgaagatgcgaaagcgaacgcaaaa
ttaaacaatatagaaaactgcaacttttattccggtaaagctgagtacacactgccggcc
gtgcttgcgagagctgccggggatgatattatagccattgtggatccaccaagagccggg
ttacacatgacagcaataacaacgctgcgcaacaacaagcgtgtcaagcggctcatatac
atgtcgtgcagcccggcgtcggtcaccaagaactttgtggacctcacaagggcctcctcg
aagacgttacatggcgcgcctttctcgcctgtatgtgctctgcccgtggatatgttcccg
catacgaagcatgtagaattgattgtgctgtttgaaagggaacaggaacctacaagagat
gtagaaaaacctgcagagaaaattgctgaagaagaaactgtgcaagaatcaaaagaagac
ggtgcaattattgaaaataatgtaaataatgaagatgtggaatcgtga
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