Colias croceus (clouded yellow): 123696521
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Entry
123696521 CDS
T08651
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123696521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123696521
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123696521
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123696521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5660
DUF2433
Motif
Other DBs
NCBI-GeneID:
123696521
NCBI-ProteinID:
XP_045498741
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Position
12:complement(9714750..9733866)
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AA seq
747 aa
AA seq
DB search
MAHVAVSKFRQIPKKINRGKVKNKIRLGDECKDILDMTIASEIDRCLKKVTEGVETFEDI
WQKVHNATNSNQKEKYEADLKKEIKKLQRLRDQIKSWIASGEIKDKSTLLEYRKLIETQM
ERFKVVERETKTKAYSKEGLGAAQKLDPAQKEREEMSSWLISSIDALNLQIDLFESEVES
LLVGKKKRLDKEKQDRMEELKLKLERHRYHIKKLETLLRMLDNMSVEVEQASITSQIKNI
REDVEYYIVSSLEPGYEENEYIYEDINGLEEVELSGAGVPSSATTDSNNSNDSPGSPTSM
LSGTSPPTSPALDLHNHTSDSVDIIDKKKKDDVSKPVKPLPLRAVSCGAAPSPANLTALN
HSATNNSINNSTGASGTSTPIKPPAPSSPHQRPNNTEVLENGPVSNTPVHTATHLPPPTI
PAPTSKSSSATTLSNAIANPNPNASTNASVNANPSVNVNANASVNSNASVNSSVSASVNT
SARSVTPSPPSPLAVNGPVHNAHHTPQHMLNNGRVSETPSTPALSAASGVSAASGAGAGN
PAAGPERPTTASLKSMAQEAVHRAGLDAHHTQNTRRGVPLSQAHIPPLLGVAPLGPLPLN
SVREHQVQFQMMEAAFYHMPHPSDSERTRVYLPRNICQTPAYYNQVLLPHSDTVEFFQRL
STETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIY
FDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgttgccgtgtctaaatttcgtcaaatacccaaaaaaatcaaccgtggtaag
gttaagaataagattagacttggcgatgaatgcaaggacatcttagacatgactatagca
agtgaaatagataggtgtttaaaaaaggtcacagaaggtgtggagacgtttgaagacatc
tggcagaaggtgcacaatgcgacgaacagtaatcagaaggagaaatatgaggcagatctc
aagaaggaaattaaaaaactccagaggctacgggatcagatcaaatcgtggatcgcatct
ggagaaattaaggataagagtacacttttagaatataggaaactaatagaaacacaaatg
gaaaggttcaaagttgtcgagagagaaacaaagacaaaggcatattcaaaggaaggatta
ggagctgctcaaaaacttgacccggcgcagaaggagcgagaggagatgtcatcatggctc
atatcctctattgacgcacttaatttacaaattgatctcttcgaatcggaagtggagtca
ctattagtgggtaaaaagaaacgattggacaaggagaaacaggacaggatggaggaatta
aaattgaaactcgagaggcataggtatcacataaagaaactggaaacgttgttaaggatg
ctcgacaacatgtccgtcgaagttgaacaggcatccataacttcccagataaagaacatt
cgagaggacgtcgagtactacatcgtgtcgtccctagagcccggttatgaggagaacgaa
tacatatacgaggacattaatggcttggaggaagtggaattgagcggagctggtgtaccc
tcatcggcaacgacggatagtaacaatagtaatgactcacctggatcaccgacaagcatg
ctgtcaggcacgagtccgcccacatcgcccgcgctagacctacacaaccacacgtcagac
tccgtagacatcatagacaagaagaagaaggacgacgtaagtaaaccggtcaagccgcta
ccgctccgtgcggtgtcgtgcggcgcggcccctagtccggctaaccttaccgcgctcaat
cactccgccacaaacaatagtataaacaacagtacgggagcgtcaggcacgtcgacgccg
atcaaaccgcccgcgcccagttctccgcaccagcggcctaataatacggaagtgttggaa
aatggtccagtgtcgaacacgcccgtacacacggcgacacacctaccgccgcccacaata
ccagcccctacgtcaaaaagttcgtccgcgacgacgttatcgaacgcgatcgcgaacccc
aacccgaacgcgagcacgaacgcgagcgtgaacgcgaaccccagcgtgaacgtgaacgcg
aacgcgagcgtgaactcgaacgcgagcgtgaactcgagcgtgagcgcgagcgtgaacacg
agcgcgcggagcgtgacgccgtcgcccccgtcgccgctcgcggtcaacgggcccgtgcac
aatgcgcaccacacgccacagcatatgttgaataacggcagagtgagcgaaacgccgagc
acgccggcgctgagcgcggcgagcggcgtgagcgcggcgagcggcgcgggcgcgggcaac
ccggcggccggccccgagcggcccaccaccgcgtcgctcaagagcatggcgcaggaagcc
gtgcaccgcgcggggctcgacgcgcaccacacgcagaacacaagaagaggtgtcccccta
tctcaggcgcacatcccaccgttattaggagtcgcgccgctggggcccctgccgcttaac
tcggtacgtgagcaccaagtgcagttccagatgatggaggcggcgttctaccacatgccg
catccatcagactcggagcgcacgagggtgtacctgccaaggaacatttgtcagacgccc
gcgtattataatcaggtgctcttaccccactcggacacggtggagttcttccaacgtctc
tcaacggaaacgctattcttcgtgttctactacatggagggcacgaaggcgcagtacctc
gcggcgaaagcgctgaagaagcagagctggcggttccacaccaagtacatgatgtggttc
cagaggcacgaggagccaaaggttatcaatgaggagtatgagcagggcacatacatatac
tttgactacgagaagtggggccagcgcaagaaggagggcttcacgttcgagtacaagtac
ttagaggaccgcgacctgaactga
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