Colias croceus (clouded yellow): 123696801
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Entry
123696801 CDS
T08651
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123696801
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
123696801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_14
TPR_8
TPR_CcmH_CycH
TPR_17
TPR_11
TPR_10
TPR_16
TPR_6
ARM_TT21_5th
TPR_7
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
Coatomer_E
SNAP
DUF6584
Motif
Other DBs
NCBI-GeneID:
123696801
NCBI-ProteinID:
XP_045499123
LinkDB
All DBs
Position
13:7732449..7742316
Genome browser
AA seq
1210 aa
AA seq
DB search
MSLEIPLMSTDEVIELDPEQLPSGDEVLSILQQERSQLNVWINVALAYYKQKKIDDFLKI
LEASRVDANIDYRDFERDQMRALDMLAAYYVQEANKEKSKDKKKELFTKATLLYTMADKI
IMYDQNHLLGRAYFCLLEGDKMGQADTQFNFVLNQSPNNVPSLLGKACIAFNRKDYRGAL
AFYKKALRTNPNSPAALRLGMGHCFMKLNNQEKARMAFERALQLDSQCVGALVGLSILKL
NQQESESNKMAVIMLSKAYAIDPKNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTENEA
MRAESCHHLARAFHAQGDCDQAFQYYYQATQFAPPNFVLPHYGLGQMYIYRGDTENAAQC
FEKVLKAQPGNYETMKILGSLYANSPSQLQRDIARQHLKKVTEQFPDDVEAWIELAQILE
QNDLQGSLNAYSTAMKILKDKVNADIPAEILNNVAALHYRLGNLPEAMKYLEEALEREKA
DAETLDAQYYNSIAVTTMYNLARLNEALCVYNKAEKLYKDILKEHPNYIDCYLRLGCMAR
DKGQIYEASDWFKEALKVNIEHPDTWSLLGNLHLAQQEWGPGQKKFERILQNSSTSTDAY
SLIALGNVWLQTLHQPCREKDREKRHQERALAMYKQVLKNDQKNIWAANGIGCVLAHKGC
INEARDIFAQVREATADFPDVWMNIAHIYVEQKQYINAIQMYENCIRKFRAAHSVEWLTW
LARAQTLAGRARAARGSLLRARRVAPHDSALLYNTALALRRLAAHVLKDERSELRVVLRA
VHELHVSHRYFQRLATVESGEGAERARYEPSAAAGEARTCADLLSQAQWHVARARRQHEE
EVTLRDRQREQREAFRRQQEEERKRREEEMAKSTVEMLQKRQEFKEKTKNALLFADMPTE
SKAKGRRRRDEYVSDSGSGSDRPREEGREPKQKKRKREAGEGKKGRGKKTRDRRGSGSDS
DPPRKRGKKKGERGIGRREKAKMVEEKLSSKQRAKIVSKETISTSESDSDASRKSRSRSR
SRSRSRSRSRSGSRSPPANKGRKRIMSASDSDRSRSKSRSKSRSRSRSGSAKSRSKSRSK
SRSRSKSGSRSRSRSRSKSKSRSKSKSRSKSRSRSKSKSRSKSRSKSRSKSRSRSKSGSR
SKSPSRSRSRSKSRSKSKSVSRSRSRSKSGSRSRSGSRSRSGSRSRSGSRNSRPATPESR
KSVSASEDEA
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgaaatacctttgatgagcaccgatgaggtgattgagctcgacccagaacag
ctaccatcaggtgatgaagttttgagtatattacaacaagagcgctctcaacttaatgtt
tggatcaatgttgctcttgcgtactacaaacaaaaaaagatcgatgatttcctcaaaata
ctggaggcatcccgtgtggatgccaacattgactatagggactttgaaagagaccaaatg
cgtgctctcgacatgcttgccgcgtactatgttcaagaagcaaataaagaaaagtcaaaa
gacaagaaaaaagagctttttacaaaagctacacttctgtacacaatggcagataaaatt
attatgtatgaccagaatcatctacttggccgtgcatacttttgcctgcttgaaggtgat
aagatggggcaagcagatacacagtttaattttgtactaaatcaatcaccaaacaatgtg
ccttctctacttggtaaagcttgtattgcattcaatcgtaaggattacagaggtgcttta
gcgttttataagaaagcgctgagaaccaaccctaacagccctgctgctcttcgtctggga
atggggcactgctttatgaaattaaataaccaggagaaagctaggatggcttttgaaaga
gcattacaacttgattcacaatgtgtgggagcacttgtgggcctgtcaatattaaaactc
aatcaacaggagagtgagtccaataaaatggctgtgataatgctgtctaaagcatatgcc
attgatcccaaaaatccaatggtattaaaccacttggctaatcattttttcttcaagaag
gattatggcaaagtgcaacatcttgcattacatgcatttcataacacagaaaatgaagca
atgagggcagagagttgccatcatctagccagagcttttcatgcccaaggtgactgtgat
caggcttttcagtattattatcaggcaacacagtttgcccctcctaactttgtattgccg
cactatggtctcggacaaatgtatatctacagaggagacactgaaaatgcagcacagtgt
ttcgaaaaagtacttaaagcacaacctggaaattatgaaacaatgaaaattcttggttcg
ttgtatgctaactctccttcacaactacaaagggacattgcaagacagcacttaaagaag
gtcactgaacagttccctgatgatgtggaggcttggattgaattggcacaaatattggaa
caaaatgatttacagggatctctaaatgcttatagtacagctatgaaaattctgaaagac
aaagtcaatgctgatattcctgcggaaatccttaataatgtggctgctcttcattatcgt
cttggaaatttacctgaagctatgaagtatttggaagaagccttggaaagagagaaagca
gatgccgaaactttagacgcacaatactataattctattgccgttaccactatgtacaat
ctagctaggttgaatgaagcactctgtgtatataataaagctgaaaaactgtataaagat
atattgaaggaacatcccaattatattgattgctacttgaggttaggttgcatggcgcgc
gacaagggtcagatctacgaagcgtccgattggttcaaagaagcgttaaaagtgaacata
gagcacccggatacgtggtctctgttgggtaacctgcatttagctcaacaggagtggggc
ccgggacagaagaaattcgaaaggatattgcagaattcgtctacgtctaccgatgcgtac
tcgctgatcgctctcggaaatgtctggcttcaaactcttcaccagccgtgccgggagaag
gatcgcgaaaagagacatcaggagagagcactcgctatgtacaagcaagtgttgaagaac
gaccagaaaaacatttgggcagctaacggtattggttgtgtactggcgcataagggttgt
ataaatgaagcgcgtgatattttcgcccaagtgcgagaggcaactgccgactttccagat
gtatggatgaacatcgcacacatatatgttgaacagaaacagtacatcaatgctatacag
atgtacgagaactgcatccgcaagttccgtgcggcgcactcggtggagtggctgacgtgg
ctggcgcgcgcgcagacgctggcggggcgcgcgcgggcggcgcggggctcgctgctgcgc
gcgcgccgcgtggcgccgcacgacagcgcgctgctgtacaacaccgcgctggcgctgcgc
cgcctcgccgcgcacgtgctcaaggacgagcgctccgagctgcgcgtcgtgctgcgcgcc
gtgcacgagctgcacgtctcgcaccggtacttccaacgtctggcgacagtggagagcggt
gaaggcgcggagcgggcgcgctacgagccgagcgcggcggcgggcgaggcgcgcacgtgc
gcggacctgctgtcgcaggcgcagtggcacgtggcgcgcgcgcgccgccagcacgaggag
gaggtcacgctgcgggaccgccagcgcgagcagcgggaggcgttccgccggcagcaggaa
gaagagcgcaaacgccgcgaggaagaaatggccaaaagcacagtggagatgctgcagaag
cgtcaagagttcaaggagaagacgaagaacgcgctgctgttcgcggacatgccgaccgag
agcaaggcgaagggccgccgccgccgggacgagtacgtgtcggactcgggcagcggcagc
gaccgcccaagggaggagggtcgcgagccaaaacaaaagaaacgcaagcgcgaagccgga
gaaggcaagaaagggcgcggcaagaagacgcgcgaccgacgcggcagtggcagcgacagc
gatccgcccaggaaaagaggcaagaagaagggagaacggggcatcggccgtcgcgaaaaa
gccaaaatggttgaagagaagctcagcagcaagcagcgcgcgaagattgtgtcgaaggaa
acaatctcgacgtccgaatcggattcagacgcgagtcgcaagtcgcgaagtcgcagtcgc
agtcgcagtcgtagtcgcagtcgcagtcgcagcggcagtcgcagcccgcccgctaacaag
ggacgcaagaggattatgtcggcgtcggatagcgataggtctcgctcgaaaagcagatca
aaatcgcgtagtcgctcacgttctggttcagcgaaaagtcgatctaaaagtcgatccaag
agccgatccaggtccaaaagtggttcacgatcgaggtccaggagtaggtccaagtcgaag
agccgctccaagtcgaagagccgctccaagtcgaggagccgctcgaagtccaagtcgaga
agcaagtcgagaagcaagtcgagatccaagagtagatctcgatcgaagagcgggtcgagg
tcgaaaagtccgtcgagatctcgttcaaggtccaaaagccgctccaaatcaaagagcgtt
tctaggtcccgatccaggtctaaaagtggatcccgtagtcgttctggatcacgatctagg
tctggatctagatctagatctggatccaggaactccagaccagcaacgcctgagtctagg
aagtctgtatcagctagtgaagacgaagcttag
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integrated database retrieval system
