Colias croceus (clouded yellow): 123697488
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Entry
123697488 CDS
T08651
Name
(RefSeq) ribonuclease 3 isoform X1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123697488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123697488
03009 Ribosome biogenesis [BR:
ccrc03009
]
123697488
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123697488
Enzymes [BR:
ccrc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
123697488
Messenger RNA biogenesis [BR:
ccrc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
123697488
Ribosome biogenesis [BR:
ccrc03009
]
Eukaryotic type
90S particles
RNase
123697488
Prokaryotic type
rRNA processing factors
123697488
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
123697488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
123697488
NCBI-ProteinID:
XP_045499973
LinkDB
All DBs
Position
14:5767844..5781899
Genome browser
AA seq
1399 aa
AA seq
DB search
MSLPPIDFTVPPPRLNVPAPPVATVPSQTLFNYPPPPPPAPSTNLSQPYSSVQGMPPMTI
PPLSHTTSYPPPPYPPPYPPTQPPPSYGYYGDTGYYYNQATTNNENQCTSRSWSSKSSAS
EMKVNEKSPISTPSSSRCSNRHDDSRSVEIFKKDSSEKPWSSKDSIASSSRSRISPRRDC
SYDRERKEARSRSYRSRSPSYSSSYSHHSRSSSHRERDDRYYRKRYEEERREYELRKYYL
ERRERHRYERERSSSHRREHGDDRYEDKYRPSSHRSRESSSVSSRRSEAPHKPMTDREKI
LEDYRRNYCKTSEDLIKRMEKWSKEHQSDEEEQNPKIWYRSSPAELYYKAIEGGSGVEQT
RKLEKVCENFFTLLIDRGRKARPEVDELPPLKPQKAKRCKHHDEGSSSSSSSSSEEEDCL
DEENLQGYTDRMMLELQRKQSHPRRLHPELWFNNTGEMNGGPLCRCSARARRFGIRHGVY
AGEQQFPKCIPTQSNIEKLYHYRITVSPPTNFLIKAPTIISHDEHEFLFSGFSMFSHYKL
AKLPTCKVIRFNIEYTILYVEEPAPKNFTVQELDMFEEFLFKELLELVDLDLGKGSDTTC
SQFHFMPRFVRYLPEGGCEVLSMCEVLKYLIDESGLLIPPESLEEVHNMDHYHWQKFVDR
IKGMIVTYPGKKPCSVRVDQIDRSPPFSVKNSKDISTFYPEIVHFGIRPPQLSYAGNPEY
QKAWRFYVKYRHLIANMAKPSFNERQKLAAKEATLQEMRTQSKMKRDVTVAISSEGFHTT
GLMCDVVQHAMLIPVLVRHLRFHKSLDSLENIISYKFKQRALLQTALTHPSYRENFGTNP
DHARNTLTNCGIRQPEYGDRRIHYTRKKGIVTLINIMSRFGKSNETESEIKHNERLEFLG
DAVVEFISSIHLFKMFPGLAEGGLATYRAAIVQNQHLALLAKNIGLEQYMLYAHGSDLCR
EVVMRHAMANCFEALMGGLFLDAGLEITDRVFAQALWHNEPILYDIWMKERAHSLQEQEP
LGDRQYIKDFEFLQKLTAFEESIGVKFKHIRLLARAFTDRSVGFTNLTLGSNQRLEFLGD
TVLQLVVSDKLYRHFPEHHEGHLSLLRSSLVNNRTQAMVCDDLNMSDYAIYNNPKAKPTA
KKHKADLLEAFLGALYIDKNLEYCQVFCNACLFPRLQEFIMNQDWNDPKSKLQQCCLTLR
SMEGGEPDIPVYKVIECLGPTNTRVYTVGVYFRGRRLAAGRGHSIQEAEMNAAEQALSCA
HELFPQLDHQKRVIAKSMKRKRKRHDGVDSYNSTKDILLKQDEDKVPKAYRSDNKLEESS
ESDNPVSDTEVKELKSDDERHDNDDDDSGLDSDTETDKYENVQVSSLLNDMEKLKQDLIA
RNEYDKLKEKCRKSDSDDD
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctccaatcgattttaccgttccaccgcctcgattaaatgttccagcacct
cctgtagccaccgtgccgtcgcaaacgttgttcaactatccgccgccaccaccaccggca
ccctcgaccaatctatcacaaccttatagttctgtacaaggaatgccaccaatgactata
ccaccgctctcccatacaacttcatatccgccgcctccctacccgcctccttacccaccc
actcaaccgccaccaagctatgggtactatggagacacaggttattattataaccaagca
accacaaacaacgaaaatcaatgcacatctcgaagctggagtagcaaatctagtgctagt
gaaatgaaggttaatgaaaaatcccctatttccactcccagttcttccagatgttccaat
agacatgatgattcacggagtgtggaaatatttaaaaaagattcaagtgaaaaaccctgg
tcatccaaagatagtatagcgtctagctcaaggtctcgaatcagtcctagaagagattgc
agctatgatagagagagaaaggaagcaagaagcaggtcttacagatctagaagtccaagt
tatagttcgagttacagccaccatagcagaagcagttcccacagagaaagggatgataga
tattataggaaacggtatgaagaagagagaagggaatatgagcttaggaaatattatttg
gaaagaagagagagacacaggtatgaaagagaaaggtccagtagtcatagacgggaacat
ggagatgatagatatgaggacaaatacaggccttcgtctcataggagcagagaatcatca
tctgtttcatcaagaaggtctgaagcaccacacaaaccaatgactgatagagaaaaaata
ttagaagactacaggagaaattactgtaaaacttcagaagatttaatcaagaggatggag
aaatggtctaaagaacatcaatctgatgaagaggagcagaatccaaaaatatggtacaga
agttctccagctgaattatattacaaggcaatagagggtggtagtggtgtggaacaaact
cgtaaactggagaaagtgtgtgagaatttctttactctgctcattgatagaggcaggaaa
gcaaggcctgaagttgacgagctgcctcccttgaagccacagaaggctaagcgatgtaaa
catcatgatgaaggttcatcttcttcatcatcatcttcatcggaagaagaagattgtctg
gatgaggagaatctgcaaggctatacagacagaatgatgttggaacttcagagaaagcag
agtcatccaaggagattgcatccggaattatggttcaacaatactggtgaaatgaatggt
ggcccgctgtgcagatgtagcgctcgggcaagacgattcggtattcgccatggagtgtat
gcgggagagcaacagtttcccaagtgtatcccaacacagagcaatattgagaaattgtac
cattatagaataaccgtatcgccccccaccaattttcttatcaaagctccgacaataata
agccatgatgaacacgaatttctgttttctggtttttcgatgttctcacattacaagttg
gcgaaattacccacatgtaaagttataaggtttaatatcgaatatactattttgtatgtg
gaagaaccggcgccaaagaattttacagtccaagagctggatatgtttgaggaatttcta
ttcaaggagttattagagttagtagacttggaccttggtaaaggttcagatacaacttgt
tcccagtttcattttatgccacgatttgtaaggtatttaccagaaggaggttgtgaggta
ttatcaatgtgtgaagtattaaaatacttaatagatgaaagtggtctattgatcccacca
gaatcactcgaagaagtacataacatggatcattatcattggcaaaaatttgttgacagg
attaaaggcatgatagtgacatatccagggaaaaagccctgttcagttcgagtggatcaa
atagatcgcagtcctccgtttagtgttaaaaattccaaagatattagtacattttacccg
gaaattgtgcatttcggtatacgaccacctcaactcagttatgcgggtaatccagaatac
caaaaagcctggcgtttttacgtaaagtaccgtcatttgatagccaacatggcgaaacca
tctttcaacgagcgccaaaagctcgcggccaaagaagcgacgttacaagaaatgcgcaca
cagagtaaaatgaaaagagatgtcacagtcgctatatcgtctgaaggtttccacactacg
gggcttatgtgtgatgttgtgcaacacgccatgttaatcccagttctggtccgtcacttg
cgtttccacaaatctctagacagtctcgagaacataatcagttataaattcaaacaaagg
gctttacttcaaacggctttaacgcacccttcgtatagagagaactttggcacaaatcct
gatcatgcgagaaatacgctaacaaattgtgggataagacaacctgagtatggggatagg
agaattcattatactagaaagaaaggtattgtgaccctaatcaacataatgtcacgtttc
ggcaaaagcaacgaaacggaatcggaaatcaaacacaacgagagactcgagttcctcggt
gacgcagtggttgagttcatatcgtccatacatttgttcaaaatgttccccggtttagct
gaaggtggtctagctacgtatagagcggctatcgtgcagaaccaacatctagctttgttg
gctaagaatataggcttagaacaatacatgctgtacgcgcacgggtcggatttgtgtcga
gaagtagtgatgcgtcacgctatggccaattgctttgaagctctcatgggcggacttttc
cttgatgctggacttgagataacagatcgcgtattcgcacaagcgctatggcacaacgag
cctatactgtacgacatttggatgaaggaacgagcacactcgttgcaagaacaagagcct
ttgggagatcggcagtatatcaaagactttgagtttctgcaaaagttgaccgcttttgag
gagtctataggtgtaaaattcaagcacattcgtctcctagcgcgagcattcacagaccgt
tcagtgggtttcacgaacctaaccctaggttctaaccagcgtttagagttcctaggcgat
acggtactacagcttgttgtatctgataaactgtataggcacttccctgaacatcatgaa
gggcatttgtcgttactacgttcgtcactagtaaacaaccgtacacaagcgatggtgtgc
gacgaccttaacatgtcggactacgcgatatacaacaaccctaaagcgaaaccgaccgcc
aaaaaacataaggctgacctgcttgaagctttcctgggtgctttgtatattgataaaaat
ctagaatactgtcaagtgttctgtaacgcgtgtctattcccacgtttacaagagttcatt
atgaatcaagactggaacgatccaaagtcgaaattgcagcaatgttgcctcactctacgc
tctatggaaggaggggaaccggatatacctgtttacaaggtgatcgagtgtctgggcccg
acgaacacgcgcgtgtacacggtgggcgtgtacttccgcgggcggcggctggcggccggc
cgcggccactccatacaggaggccgagatgaacgcggccgagcaggcgctcagctgcgcg
cacgaactattccctcaactggaccaccagaagcgtgtaatcgcgaagagcatgaagcgc
aagcgcaaacgtcacgacggtgtggatagctataacagcactaaggacattctcctcaaa
caagacgaggacaaagtgcccaaagcgtatcgatcagataataaactggaagaaagttcc
gaatcggacaaccccgtatcagacacggaagttaaagaattaaaatctgacgatgaacga
catgacaatgacgatgatgactctggtcttgatagcgacacagagacagataaatatgaa
aatgtacaagtcagcagtcttctaaacgatatggaaaaattgaaacaggatctaatagct
cgcaacgaatatgacaagttgaaggagaaatgcaggaaatccgattcggatgatgattag
DBGET
integrated database retrieval system
