Colias croceus (clouded yellow): 123698512
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Entry
123698512 CDS
T08651
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03013
Nucleocytoplasmic transport
ccrc03015
mRNA surveillance pathway
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123698512
09122 Translation
03013 Nucleocytoplasmic transport
123698512
03015 mRNA surveillance pathway
123698512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123698512
03041 Spliceosome [BR:
ccrc03041
]
123698512
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
123698512
Spliceosome [BR:
ccrc03041
]
Common components
Common spliceosomal components
Cap binding complex
123698512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DnaG_helical
DUF4611
AATF-Che1
Peptidase_S49_N
JCAD
Motif
Other DBs
NCBI-GeneID:
123698512
NCBI-ProteinID:
XP_045501116
LinkDB
All DBs
Position
16:7297645..7314064
Genome browser
AA seq
798 aa
AA seq
DB search
MNRRRANEEEDGYERLHRKRRRVSENQEIEDRLESLILRVGEKSSSSLESNLEGLASVLE
ADLSTFRVKILRILTECAIRMPEKCTIYATLVGLLNAKNYNFGGEFVDYIVKTFKENLKC
GKWNAARYCLRFISDLVNCHVLAASSLLTLLETLVDCANEDSVPQVRRDWFVFAVLSTLP
WVGRELYEKKESQLDHLLVTIEVFLNKRSKKHWPALKVWSADSPHLQEEYLDCLWAQIKK
LRQDNWSEKHIPRPYLAFDSILCEALQHTLPTIQPPPHNDGDSYPMPRVIFRMFDYTDCP
DGPVLPGAHSIERFLIEEHLHNIIEAYHLERKECAAQLLCFPYKAKIPLEYCIVEVIFAE
LFNLPRPRYLEICYGSILIELCKLQPATMPQVLAQATEILFMRIDTMNVACFDRLVNWFS
YHLSNFQYRWSWEDWEGCAQLDPDHPKPRFIREVLSKCLRLSYHQRIKDMVPETLAAFVP
LKPEPIYKYSMEGAASLPGTEAAHQLVVCVRNKCTPEEALNVLRDLPNPLREGEAASTHA
ASYNPLKIDVFVQTLLNLGSKSISHSFAAISKFHYVFKILAESEEAQICVLRNVWELWQR
HPQMVCVLVDKMLKTQIVECSAVATWLFSKEMASHFVNAPLWEILHLTIDKMNKHVSKLS
KELQEAREALARADSSSSDSEDESGSKKKKDQDKPTEEAVERMEERLEMGHTDQKRLFLI
VFQRFIMILSEHLVRADTDARDPLTAWYTTTVGRLTQVFLLHHEQVQKYSSTLETLLFTQ
DLDPHILDVFHQFLALTA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcgaagggccaatgaagaagaagatggatacgaacgtctgcacaggaaacgg
cgccgtgtatctgaaaatcaagaaatagaagacagattagaatccctaatactgcgcgtt
ggtgaaaagagtagttcgagcttggaaagtaatctggaaggtttggcaagtgtactggaa
gccgatttgagtacattccgcgtaaagatcttacgtatattgacagaatgtgcgatacgg
atgccagagaaatgtactatctatgccactcttgttggtctcctcaatgcaaagaactac
aattttggaggagaatttgttgattacatagtaaaaacattcaaagaaaatctgaaatgt
ggaaaatggaatgcggctagatattgcttgagatttatatcagacttggtgaactgccat
gtgttagcagcgtcttcattactgaccttattggagacattagttgattgtgccaatgag
gatagtgtacctcaagtgaggagagattggtttgtttttgctgttttgtctacactgccc
tgggtgggtagagagctgtatgagaaaaaggaatcccaattggatcacttgctagttact
attgaagtgtttttaaacaagcgcagtaaaaagcactggcctgcgttgaaagtttggtca
gcggactctcctcacttacaggaagaatatttggattgcttgtgggctcaaataaagaag
cttagacaagataattggtctgaaaaacatatacctcggccctatttggcttttgattca
attctttgtgaggctctgcaacacacactaccaacaattcagccaccaccacacaatgac
ggtgactcataccccatgcctcgagttatattccgcatgtttgactacaccgactgtcct
gacggtccagttctccccggagcacattccatagagagattcctcattgaagaacatttg
cataatattatagaggcttatcatctcgagaggaaagagtgtgctgctcaattactctgt
tttccatacaaagctaaaataccactggagtattgtattgttgaagtgatatttgcagag
ctttttaacttaccgaggccgagatatttggaaatttgctacgggtctatattaattgag
ctgtgtaaactccaaccagcgacaatgccgcaagtactggctcaggcaacagagatattg
tttatgagaattgatactatgaatgtcgcctgctttgatagattagtgaattggttttcc
taccatttgagtaacttccaatacagatggtcatgggaggattgggaggggtgtgctcag
cttgaccctgatcatccaaaaccaaggtttattagagaagttctaagtaaatgtttaaga
ttgtcatatcaccaaagaataaaggatatggtacctgagaccctagctgcttttgtacca
ttaaaaccagaaccaatttacaagtattccatggagggagcagcatccctcccaggcacg
gaagcagcccatcaactagttgtatgcgtgaggaataaatgtactccagaagaagcatta
aacgtcctccgggacttgcccaatcccctccgggaaggggaggctgcgtcgacacacgcg
gcgtcgtacaacccgctgaagatcgatgtatttgtgcaaacattgctcaatcttggcagc
aagagcatatcgcacagctttgcggctatatccaaattccattatgtttttaagatcctg
gcagaatctgaagaagcgcagatctgcgtgctccgtaacgtttgggaactttggcaaaga
cacccgcaaatggtgtgcgtgttagtggacaagatgctgaagacacagatagtggagtgc
agtgcggtggccacgtggctgttctccaaggagatggcctcgcactttgtgaacgcgccc
ctgtgggagatactgcacttgacgatcgataagatgaacaagcacgtgtctaaattgagt
aaggaattacaagaagctagagaggctctcgccagagctgactctagtagttccgattct
gaagacgaaagtgggagcaagaaaaagaaagatcaagacaaacccacggaagaggccgtg
gagcgcatggaggagcgtctggagatggggcacacggaccagaagcgcctgttcctcatc
gtgttccagcgcttcatcatgatcctgtcggagcacctcgtgcgagctgatacagatgca
cgggacccgctcaccgcctggtacaccaccactgttggcaggctcacgcaggtcttcctg
ctgcatcacgagcaagtgcagaagtacagcagtacgctagaaactctcctgttcacacaa
gatctcgatccgcatattctggacgtattccaccagttcctggcgctaactgcgtga
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