Colias croceus (clouded yellow): 123698583
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Entry
123698583 CDS
T08651
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123698583
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123698583
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123698583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
DEAD
AAA_19
HA2_N
Herpes_ori_bp
AAA_22
AAA_14
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
123698583
NCBI-ProteinID:
XP_045501215
LinkDB
All DBs
Position
16:6737889..6755434
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AA seq
1156 aa
AA seq
DB search
MDRKSRHQRYSSKRRRSRSRSTERRDRVKIRKRAPSPTTTADIIEETEDFSFLNYKRNLN
KMIQYSNDTNTVANSIDDFWIFVKKYEATLRKAGKPIIPETHDTNTNNSEIKQSFSKTDC
INFKVKIKFMDTVYDDRSKRRLDERKFKVFLNIISIYIDFKNKEKFDKLKKLRKAQKELP
VAKYRNEIVSAVQNEKVVVVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACVSLSKR
VAFEMLSQFETKVGYQIRFEKSKTADTSICFITEGLLLRQMSSENLPNYDVIILDEIHER
HLMGDFLLGVLKCLIHTRSDIKLVLMSATINIQLFEDYFSAESAVVIQVPGRLFPIELHY
KPVLIDEKPTRDDRLDPQPYVQIMSLIDNKYPSDERGDLLIFMSGVQEITAICDAAQQYA
EKNKSWIVLPLHSGLSLVEQDKVFDYPPEGVRKCIVSTNIAETSVTIDGIRFVVDSGKVK
EMSYDASTKMQRLKEFWISKASADQRKGRAGRTGPGVCYRIYSENQYTDMDAFSTPEVSR
VPLASLLLLMSSLGVNDVRRFPFIDAPPEDAIEESLLELKQHGALTSNEKLTALGKALAN
LPVEVSLAKALVVGSATLPPHKLDSALALTAALGIRSIYTTRAHRDFECENARKPDESDH
GDPITLISLYCAWLKEKSKGGGRAWCRRRGIEEQRLYELTKLAAQLKNLLQDNNLMETPE
AESMSSAERSLRHGQMKQLKDMRRQYKQKAAEDSKKRKRLKVDSWEIVDEKGDDDNVMDI
RDIEFRLTNDASRIQALISGASANSGRDLVMLKIVLCRALYPQIAVADDFNHCKTVTDQL
YHTWSKPFVFLHPTSYFGKQPRTLQLTESDIQTDGPPGFKSKLALSSRHQILCYLSLLET
TKPYIVNSMRMPAAQTLLLLAHSIDTNYGFTRLICDSWLLLEFPYPETGLNLLFKASKLR
QRWDALINRRLLDASPNKSVESELAKNKSKLPYEELQYELSKDMSAYMNSDVYYTIKRLL
PADLKILYTIDECASVVPNPFCSDFEGRPHEKKGGVYVTDNIVFNCVVDSDWSYNSYQES
YSIPWKCPNCEITVCLSPLEKLQHTEFICSSRKIEKEEKPLTRENRPNAKEYKCEVCKET
LYMTPVEILRHKKSCK
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaagtctagacatcagagatattcttcaaaacgaagacgatcacgctctcgg
agcaccgagcgacgagacagagttaaaataagaaaaagagcaccatctcctaccactact
gctgatattattgaagaaactgaagattttagtttcttaaattataagcgaaacttaaat
aaaatgatacaatacagtaacgatacaaatacggttgcaaatagtattgacgacttttgg
atttttgttaaaaagtatgaagctactttgagaaaagctggaaagccaatcataccagaa
actcatgatacaaacacaaacaattctgaaataaagcaatcgttttcaaaaactgactgt
attaattttaaagtaaaaataaaatttatggacacagtatatgatgatagaagcaaaaga
agattagacgaaaggaaatttaaagtgttccttaacattatttccatttatattgacttt
aaaaacaaggaaaaatttgataaactaaaaaaattaaggaaagcacaaaaagaactgcct
gttgcaaaatataggaatgaaattgtatcagctgtgcagaatgagaaagtagtagttgtg
gctggtgacacaggatgtggaaagtctactcaggttcctcaatatcttcatgaagctggt
tttcaaaatattgcttgtacacaaccaagaagaatagcatgtgtatcattatcaaaacgt
gttgcgtttgaaatgctgtcacaatttgaaactaaagttgggtatcagatccggtttgag
aagagcaaaactgcagatacaagtatttgttttattactgaaggactcttattgaggcag
atgtcctcagaaaacttaccaaattatgatgtcattatattagatgagatccatgaaaga
catttaatgggtgatttcttgttgggagtattaaagtgccttattcataccagaagtgat
attaaactagttttgatgtcagcaacaattaatatacaattgtttgaagattattttagc
gctgaatctgctgttgttattcaagtgcctggtagactatttcccatagaactgcactat
aagccagtattaattgacgagaagcccacaagagacgatcggcttgatccacagccttat
gtgcaaattatgagcttgattgataataaatacccaagcgacgaaagaggtgacctcttg
attttcatgtctggagttcaagaaataactgctatttgtgacgcagcacagcaatatgct
gagaaaaataagtcttggattgtccttccgttacatagtggactctcattggttgaacag
gataaggtattcgattatccaccagagggcgtgaggaagtgcattgtatccacaaatata
gctgaaacatcggtcacgatagatggtatacgatttgtggtagattcagggaaggtaaaa
gaaatgagttacgacgcatctacgaagatgcagaggctcaaagaattttggatatcgaaa
gcgagcgctgatcagaggaaaggcagagcaggaagaacgggtcccggcgtatgttaccgg
atatactccgaaaaccaatacaccgatatggatgcattcagcactccagaagtgtcaagg
gtgccgctggcttcactattgttgctcatgagttctctgggcgtgaacgatgttagacga
ttcccttttatagatgcacccccggaagatgcgattgaagaatcactattggaattgaaa
caacatggagcattaacatcgaatgaaaaactgacagccctaggcaaggcattagccaac
cttcccgtagaagtatctctagctaaagccctggtggtaggatctgctactttacctcca
cataagttggattccgctttggccttaacagctgctttgggtataaggtccatttataca
acgagagcgcatagagattttgaatgtgagaatgctagaaaaccagatgaatcagatcac
ggggatcccataaccttaatatctctatattgcgcttggctaaaggaaaagagtaaagga
gggggaagggcgtggtgtagacgacgagggatagaggaacagaggttatacgagctcacc
aaactggctgcgcaattgaagaacttattacaggacaataatttgatggaaactcccgaa
gcagaatcgatgtcttcggcggaaagatctctccgacacggacaaatgaaacaactgaaa
gatatgagaagacagtacaaacaaaaagcggcggaagattcgaaaaagcggaaacgttta
aaagtcgattcttgggagatagtagacgaaaagggggatgatgataatgtaatggatatt
cgtgatatagagttccgtctgacgaacgacgcgagcaggatacaggcgctcatcagtggg
gccagtgctaatagtggccgggatctcgtcatgttgaagatagtgctatgtcgcgcgtta
tatcctcaaattgcggttgctgatgactttaaccattgcaagacggtaacagaccaactc
taccacacttggagtaaacccttcgtgtttttacaccccacgtcatatttcggcaaacaa
ccccgcacgctacaactaactgagagtgacatacagacagacgggccgccggggtttaag
agtaaactggcattgtcatcgagacaccagattctgtgttatttatcgctattggaaaca
actaaaccgtatatagtgaattctatgaggatgcccgctgctcaaacattacttttatta
gcacattctattgatactaattacggatttacaaggttaatctgtgactcgtggctatta
ttggaatttccatatccagaaacaggattgaatttattgttcaaagcttccaagttgcgg
caacgttgggacgctcttattaatagaaggcttttagatgcaagcccaaacaaatcagtg
gagagtgaactagcaaaaaataaatcaaaactaccctacgaagaattacaatacgagtta
tccaaagacatgagtgcatatatgaatagtgatgtgtattatacgataaaacggttatta
ccagccgatttgaagattttatacactatcgatgaatgtgctagtgttgtgcctaatccg
ttttgtagcgattttgaaggtagaccacatgagaagaagggaggcgtttatgtgacagat
aatattgtttttaattgtgtagtagattcagattggagttacaacagctatcaagaatca
tactccataccgtggaagtgtccgaactgcgaaattaccgtatgtttgtcacctttagaa
aagttacagcatacggaatttatatgttcttctagaaaaatcgagaaggaagaaaaacca
ctgacaagggaaaatagacctaatgctaaggagtataagtgcgaagtttgtaaagaaacg
ttgtatatgacgccggtagaaatattaaggcataaaaagagttgtaaataa
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