KEGG   Colias croceus (clouded yellow): 123698770
Entry
123698770         CDS       T08651                                 
Name
(RefSeq) WD repeat-containing protein 61-like
  KO
K12602  WD repeat-containing protein 61
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    123698770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccrc03019]
    123698770
Messenger RNA biogenesis [BR:ccrc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     123698770
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_SPT8 Ge1_WD40 Beta-prop_Vps41 WD40_RFWD3 WD40_like RMC1_N Cytochrom_D1 WD_LRWD1 Beta-prop_Nup120_160 Beta-prop_DCAF4 Beta-prop_DCAF12 PEP5_VPS11_N Beta-prop_RIG_1st KNTC1_N PROPPIN Nbas_N VPS8_N Beta-prop_WDR75_2nd Beta-prop_VPS8 WDR54 PQQ_2 B-prop_COPA_B_2nd
Other DBs
NCBI-GeneID: 123698770
NCBI-ProteinID: XP_045501509
LinkDB
Position
16:2878057..2880627
AA seq 330 aa
MSITTLYYLQLKKENAHEDSIWCCGWSQIKPEKKPEEQNAENNEHSQDSNPEPEAPESYI
ITGGLDDIVKIWQLQDGKLEVKHQLEGHSLGVISVAVSPDGKTLASSSQDSSLILWDIAS
GEKLKTMETGTTDVWTLDFSPDGKNVVSGSNAGKILIFSVESGKQEQTLDTRGKFTLSVA
YSPDGKYIASGALDGIVKIFDVAQGKLVHTLEGHAKPIRSLCFSPDSQLLLTASDDGHMK
LYDVVHANLAGTLSGHASWVLSVAFSPDGKRFVSGSSDRTVRVWDLDTMQCQHVFKEHND
QVWGVKFNAESNKIVSVSEDKTVNIYDCPL
NT seq 993 nt   +upstreamnt  +downstreamnt
atgtctataactactctatattatcttcaattaaaaaaagaaaatgcacacgaagattcc
atatggtgttgtggatggagtcaaataaaacctgagaaaaaaccagaagagcaaaatgcc
gaaaataacgaacactcacaagattcaaaccccgaacctgaggctccagaaagttatatt
ataactggagggctagatgatatagtgaagatctggcagttacaagatggcaagcttgaa
gtcaaacatcagcttgaagggcattcacttggagttatatctgttgctgttagtcctgat
ggaaaaacattagctagtagttctcaagattcctcgctcattttgtgggatatagcatca
ggtgagaagctaaagactatggaaacaggaacaacagatgtgtggacgttagactttagt
cctgatggcaagaatgttgtatccggcagtaacgcggggaaaatattgattttctctgtt
gagagcggaaaacaggaacaaactttagacacaagaggcaaatttacattgagtgtagct
tatagtcctgatggaaaatacatagcgagtggtgcattagatggtattgtaaaaatattt
gatgtagcacaaggcaagctagttcatacattggaagggcacgctaagcccatcagaagc
ctgtgtttctcccctgattcacaactgctgctgactgcttccgatgatggtcatatgaaa
ctttatgatgtcgttcatgcaaacttagcaggcacattatctgggcacgcctcttgggtt
ctgtcagtagcattttcaccagacggcaagagatttgtatccggcagttcagatagaact
gtaagagtgtgggaccttgatactatgcagtgccaacatgtgttcaaagagcataatgat
caggtatggggtgtgaagttcaatgctgaaagtaataaaatcgtatctgtatctgaagat
aagacagtaaacatatatgattgtccattatag

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