Colias croceus (clouded yellow): 123698987
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Entry
123698987 CDS
T08651
Name
(RefSeq) ATP-dependent RNA helicase vasa
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123698987
Enzymes [BR:
ccrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123698987
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123698987
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
123698987
NCBI-ProteinID:
XP_045501788
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All DBs
Position
17:4547010..4560178
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AA seq
611 aa
AA seq
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MDDEWDDACDVVVPPPPTRQYTKSYDDVDEGHSLSQGRGFTSFIEDEVNDFDKGSNGFGE
RRGRGGRGGGRGRGGRGGRGGFRERGDYESNGDYNDRGDGDRGDREERGERGRGRGRGRG
GGGRGGGRGSGDEAPEGEEEKKAPVTYVPPEPTENEQEIFGSTISSGINFDKFDCIAVKV
TGENPPRPIDSFETANLRKYVLDNILKSGYRKPTPIQKHAIPIIMDGRDLMGCAQTGSGK
TAAFLLPIINTLLQDNRELVVGEDRCAQPQVIIVSPTRELTLQIFNEARKFSYGSIIKVA
VAYGGTAVRHQGDQISKGCHILVATPGRLHDFVDRNRISFESVRFVVLDEADRMLDMGFI
PSIEKMMDHATMVPSDKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGVVGGASTDVEQI
FHQVAKYEKQTMLKKLVEDNDGKRILVFVETKRTADFIASLMSEQQMLTSSIHGDRMQKE
REEALYNFKSGRHCILVATAVAARGLDIKNVDIVVNYDLPKSIDEYVHRIGRTGRVGNRG
KAVSFFDAEKDAALVADLSKILRQAEQPVPDFLQGGGPATYKSNKYGGSDIRNFNNVSAP
VETGQEPDEEW
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaatgggacgatgcttgtgatgttgttgtgccgcctccaccaacacgacaa
tacacaaagtcttatgatgatgttgacgaaggtcacagcttgtcgcagggaagaggtttt
acatcatttatagaagatgaagtaaacgattttgacaaaggcagcaatggttttggtgag
cgacgaggccgtggaggccgaggtggcggcagagggcgcgggggacgcggaggtcggggt
ggcttcagggaacggggagactatgaatcaaatggtgattacaacgatagaggcgatggc
gacagaggggatcgcgaggaacgcggtgagcgtgggcgcggtcggggcagaggccgcggg
ggcggaggccgaggtggtggccgtggtagtggggatgaagcacccgaaggtgaagaggag
aagaaagcgccagtgacttacgtgcccccagagccgacggagaacgagcaggagatcttt
ggcagcaccatcagctcgggcataaactttgacaagttcgactgtattgctgttaaggta
actggcgaaaaccccccaaggcctattgatagctttgagactgccaacttgaggaaatat
gtactggacaacatcctcaagtcgggatacagaaagccgacgccaattcaaaagcacgcc
attcctattatcatggatggcagagatttgatgggatgtgcccaaactggttctggaaaa
acggctgctttcctgcttcccattataaacacattgctacaagataaccgtgaattagtt
gttggagaagacagatgtgctcaaccacaggttataatagtatcgccaacacgagaactt
acactgcaaatattcaatgaagctagaaagttctcatatgggtccattataaaagtagcc
gtcgcatatggtggtacagcagtccgccatcaaggtgaccaaatctctaaaggctgtcac
atcctagtagcgacgccgggccgtttacacgacttcgtcgatcgcaaccgcatctccttt
gagagcgttcgtttcgtggtgcttgatgaagctgatcgtatgttggatatgggtttcatt
ccgtccatagagaaaatgatggatcatgccactatggtgcctagtgataaacgccaaact
ctcatgttctcggcgacattcccggaagacatacaacacttggcggggcgtttcctcaac
aattacctgttcgtggcggtcggtgtagtcggcggtgctagtacagatgtcgaacagata
ttccatcaagttgctaaatacgagaaacagactatgcttaagaaactcgtggaagataat
gatggcaagcgtatactagtgttcgtagaaacgaaacgcacggcggacttcatcgcgtca
ctaatgtcggaacaacagatgctgacgtcatcgattcacggtgaccgcatgcaaaaggag
cgggaagaggcgttgtacaactttaagagcggccgccattgtatattggtggctaccgct
gttgctgctaggggattggatattaagaacgtggatatagttgtaaactatgacctacca
aagagcatcgacgagtatgtgcatcgcattggccgtacgggacgtgttggtaaccgcggc
aaggctgtatcattctttgatgctgagaaggacgcggcgctcgtagcagacctgtcaaag
attctgcggcaagctgaacaaccggtgcccgatttcctgcaaggcggcggccctgccacc
tacaagagcaataaatacggcggcagcgatatccgaaacttcaacaacgtgagcgcgccc
gtagagactggtcaggaaccagacgaggagtggtaa
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