Colias croceus (clouded yellow): 123699087
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Entry
123699087 CDS
T08651
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123699087
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
123699087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3730
Focadhesin
Motif
Other DBs
NCBI-GeneID:
123699087
NCBI-ProteinID:
XP_045501911
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All DBs
Position
17:complement(9782602..9804051)
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AA seq
1198 aa
AA seq
DB search
MKMDEIEYKLKTNTSVLIVNAIDKLISTIKSKYKPGEGQKFVLENEELKFLREKCSSPEP
VVSLTACQGLLALVELNVLEIGHTMSTVVSLLPTAHNFSAIISTMAGLLILDLKSRLVPG
QPYKCQFSLRSPHHPFITVLERNRDMEDDVLAQMHALCTNHEYLVSSNSLELLRPVFLWM
TCNPQRSRGISRAWQLLLSLPQSDAQSSLLLACISCQQICNPKLIDSAFAAYSAVTESAI
YQQRSEAVVALVPMLARVCGELLRHGRDPRPCYSLIERCLSLDTPEMRTVSGLALLLLAD
NLTHTAARYLHELFNLCLNIISKCDYSVLGLNSFVGFSLQWLHLPSYLTNDALSVAAKIL
DIHQNSNPKTSLYTANLKQNTMFQNLVHTDGRLYAYYKLLDTFERVRDNPTKLRDWLKNL
TQSDSLRVELLPFLVGLCFDRRAEEDLIIEALRCIIAVVGVKKEVSVTVLPMLVYKIANE
ERPNVRLECLKGLPLMAATKENVPTLVSVLNKLKANKGVPTSLLVMLYTSLAETQVRCFP
YLQECLVDTSIGPDDLKWEVDVAKAVAVKRICDARASTHGLELVSVISSLLNRCTDKAGA
TATCLALEALGALWRGNAVAPPGTWKALEPRLGRDNRPAVQASLCKLLGEVPGLRVSTPA
YDALIADAARRLWAMVAEASPPVVEAACEALANYKIEDYKLKDVPEIYRRTVKLPPAYCK
TPVDAIRKPEDVLDYIPCEIWPEVFKNTNQAALPGVQYLVGKLIEREVRTYRSGVYNIEG
REPQSLGHLPPHSVVRGMLDCFRKQITSPTYDIQEPILLAIFSTLSAEYPRPLPPMDLSF
LHEVFHRGTPWRMNSIQLAARQALTAPSARRMVDNFLVGIEPGVTEESDIMLIFEHLPIL
CRTMPPNTLRPSVERSLAHALGNRELFTQQLASISRTLDNERIHEANRTWLCQLLEAQFS
LIADDSPLWPPYVQACRSLSTKYLERMTSPSGWWEVSSDLLRKSCSVRSALAAAGECRAP
LVWLNETVDVHASQIVEQEYSLHCMWPALRDAKDDSSTREWYLQLMARTQVAFNETDDES
SKLYLCDIFALSSIAFSGVWSFEPDTTCIISNREKRYSLLPAGLAVLVGKEGWKECSLQV
LEWLCHTRDATRDSHTARACQRSLLALRHCEQFIAHKIWTRLEHHFTPTVTSFEDMNL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatgaaatagaatacaagctgaaaaccaacacgagtgtattgatagttaat
gctattgataaattgatatctacaataaaatcgaaatataagccgggcgaggggcaaaag
tttgttttggagaatgaagaattgaaatttttgagagagaaatgttcctcaccagagccc
gtcgtgagcctgacggcatgccaaggtctactggcgctggttgaactcaatgttctagaa
atcgggcatacaatgtcgactgttgtgtctcttctgcccacggcccataacttctctgct
ataatatcaacaatggcaggtctcctaattttggacttaaagtcgcggctagtcccagga
cagccttataaatgccagttctcattgagatcacctcatcatccatttattaccgttctt
gagagaaatagggatatggaagatgacgttttggcccagatgcacgccttgtgcactaac
catgaatatttagtatcgtcaaacagcctcgagctactccgtccagtgttcctctggatg
acgtgtaaccctcaacgcagtagaggtatctccagggcctggcagctgctgctcagtctg
ccacaatctgacgctcagtcttcattgctgctggcctgtattagttgtcaacagatatgc
aacccaaagctgatagacagtgcgttcgcagcatactctgctgtgactgaatcggcgata
tatcagcagaggagcgaggctgtggtggccttggtgcccatgctggcaagggtatgcggg
gaattgttgaggcatggtcgcgatccgcgtccatgctacagtctgatcgagcgttgtctc
tccctggacacgccggagatgcgcaccgtatccgggctggctctgttgctattggccgat
aacctcacgcacacggccgcgagatatctgcacgagctgttcaatttgtgcctcaacata
ataagcaaatgtgactactcagtactcggcctgaactccttcgtcggtttctcgctacag
tggctccatctaccatcatatttgacaaacgacgctctaagtgtagctgccaaaatacta
gatatccatcaaaatagcaatccaaaaacttctctgtacacagcaaacttgaaacagaat
acaatgttccagaatttagtgcatacagacggacggttatacgcatattataaattacta
gatacatttgaacgggttagagataatccaaccaagttgagagactggttaaaaaatttg
acacaaagtgacagtttgagagtggagttactcccgtttttggtcgggttatgttttgat
agacgtgcggaagaggaccttattattgaagctttaaggtgtattatcgcagtggtgggg
gttaaaaaggaagtctcagtgacagtgttaccaatgttagtgtataagattgctaatgaa
gaacggcctaatgttaggctggagtgcttgaaggggctgccgttgatggctgctactaag
gaaaatgtaccaactttagtttccgtgctaaataaattgaaagccaacaaaggagtgcct
acatcccttcttgtcatgttgtacaccagtttggctgaaactcaggtgcgttgtttccca
tacctacaagagtgtctagttgacacttcaataggaccagatgacctcaagtgggaggtg
gacgtggctaaagctgtcgctgttaaacggatttgtgatgcgagagcgtcaacccacggt
ctagaactagtatcagtaatatcgtccctactcaaccgatgtacggacaaagcgggggcc
acggccacgtgtctcgcgctagaggccctcggggccctgtggaggggcaacgcggtggcc
ccgccggggacctggaaggccctggagccgagactgggcagggataatagacccgctgtg
caagctagcctgtgcaagttgctgggcgaagtccccgggctccgagtatcaactcccgcg
tacgacgcgctcatcgccgacgcggctcgccgtttgtgggcaatggtcgcggaggcttcg
ccccccgtggtggaggccgcttgcgaagccctagctaactataagatcgaggattataag
ctgaaggatgtgcctgagatatacagacgaacagtgaaactgccacctgcgtattgtaaa
acacccgtagatgctataagaaaaccagaagatgtcttggattatatcccgtgtgagatc
tggccagaagtgttcaaaaacacgaatcaagctgccctcccgggggtgcaatatttagtg
ggcaaactcatagagcgtgaagttcgcacataccgcagtggggtgtacaatatagagggc
agggagccgcagagcttggggcacttgcccccgcacagcgtggttaggggcatgcttgat
tgctttaggaaacagattacttcaccaacctacgacatccaagagccaatcctcctggct
atattcagtaccctatctgcggagtaccctcggccacttccccccatggacctgagcttc
ctccacgaggtgttccaccgcggaaccccctggaggatgaacagcatccagctggctgcg
aggcaagcgctcacagcaccctctgcaagacgaatggtcgataattttttggttggaatc
gaaccgggggttacggaggaatcagacattatgctgatcttcgagcacctacccatttta
tgccgcactatgcccccaaacaccctccgaccctcggtggagagaagcctggcgcatgcc
ctggggaaccgggagcttttcacccagcagctggccagcatcagccggaccctggataac
gagaggatccacgaggctaataggacctggttgtgtcaattattggaagcccagttctcg
ctgatcgctgatgatagtccgctatggcccccatacgtgcaagcctgcagatccctctcc
accaaatacctagagcgtatgacgtcaccgagcgggtggtgggaggtgtccagtgacttg
ttgcgcaagtcgtgttccgtgcgcagtgcgctggcggcggccggcgagtgcagagcgccg
ctcgtgtggctcaatgagactgtggatgtgcatgccagccagattgttgaacaagaatac
tccctccactgtatgtggccggcacttcgagatgcgaaagatgacagttccacaagagag
tggtacttgcagctgatggcgcgcactcaagtcgcttttaatgaaacagacgacgaatct
tcaaagctatacctgtgcgacatattcgcgctatctagcatcgctttcagtggcgtgtgg
tccttcgagccggatacaacttgtattataagtaatagagagaaacgatactcgttgttg
cccgcgggtttggctgtgttagtgggaaaggagggctggaaggagtgcagtttacaggtg
ctagaatggttgtgtcacacccgggacgcaacccgcgactcgcacacagcgcgggcttgt
cagcggagcttgttagcactgagacactgcgaacagtttattgctcataagatttggact
cgattggaacatcacttcacgccgacagtaaccagctttgaagatatgaatttataa
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