Colias croceus (clouded yellow): 123699516
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Entry
123699516 CDS
T08651
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03013
Nucleocytoplasmic transport
ccrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123699516
03015 mRNA surveillance pathway
123699516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123699516
03041 Spliceosome [BR:
ccrc03041
]
123699516
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123699516
Spliceosome [BR:
ccrc03041
]
Complex C
Other components
EJC/TREX
123699516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
RSB_motif
Pinin_SDK_N
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
123699516
NCBI-ProteinID:
XP_045502437
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All DBs
Position
18:complement(292145..295725)
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AA seq
411 aa
AA seq
DB search
MGTEVALSFSTLRTQLENERNSLFKLDENIKKIVQTSGRYNNESRYNPFGDHSRGGPRLG
GRNSYTEANKNDDQFFKRKHETKTVFSRLSAKTNDSDGEEDVPGPKRTRVSSAVCRELPT
RAAVLRAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTKEDKKAQVERKIEEQARQE
KERELKERRVLFAEREHKKATIKALEAKMMRVQEFEKWEESQRSLGNFILTKAKPHIYWL
PRRMSEKATEKLTSSRKYHEKCMAKKRQELQEELQRIEQRCLRQKPGAKENDPHDDVPHD
QHVHELEENGNKKRDKFAMDADDKEDSDADDQHDDKNMEQELTAVPEPEEIKMDTSTDHT
EQNDIVPNEIAPNVTVPNDIVPENAEEIPQTEPKAETVEEKKPDSNNPEHS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggacagaagtggcgttatcatttagtactttacgtacacaattagaaaatgagcga
aatagtttattcaaattagacgaaaacataaagaaaatagtgcaaacatcaggacgatac
aataatgaaagcagatacaatcctttcggtgatcactctagaggaggacctaggctaggc
ggcagaaattcgtatactgaagcaaataagaacgacgaccaattcttcaaacgtaaacat
gaaactaaaactgtttttagcagattatcagcaaaaactaatgatagtgatggagaggaa
gatgtaccaggtcccaaaagaactcgagtatcttcagcagtgtgcagggagctccccact
agagcagctgtcctgcgagcccagggggatgatgagcaagcaaggactagaaataggaga
attttcggttcacttctggggaccctgcaaaagttcaaacaggaagagattgtgttacag
actaaagaagataaaaaagcccaagtagaaagaaaaatagaagagcaagctcggcaagag
aaggaaagggaattaaaagaaaggcgagtattatttgcagagcgggaacacaagaaagcg
acaatcaaagcactagaagccaagatgatgagggtgcaagagtttgagaagtgggaggag
tctcagcgcagcctagggaacttcatcctcaccaaggccaagccccacatatactggctg
cctaggaggatgtctgaaaaggcgacggagaagttgacgtctagtagaaagtatcatgaa
aagtgcatggcgaagaaacgtcaagagctacaagaggagttgcagcgaatagagcagcgc
tgtctgcggcagaagccgggtgctaaggagaacgatccgcatgacgatgtgccgcatgac
cagcatgttcatgaattggaagaaaatggcaataagaagcgagacaaattcgcaatggac
gctgatgataaggaagacagtgatgcagacgaccaacatgatgataagaacatggagcag
gaacttactgctgttccagaaccagaagaaatcaaaatggacacaagcacagatcacact
gagcaaaatgacattgttccaaatgagattgcaccaaatgtgactgtaccaaatgacatt
gtaccagagaacgctgaagaaataccacaaacagagcctaaagctgaaaccgtagaagag
aaaaaaccagattccaataatccagaacattcctaa
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