Colias croceus (clouded yellow): 123699997
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Entry
123699997 CDS
T08651
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03030
DNA replication
ccrc03410
Base excision repair
ccrc03420
Nucleotide excision repair
ccrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123699997
03410 Base excision repair
123699997
03420 Nucleotide excision repair
123699997
03430 Mismatch repair
123699997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccrc03032
]
123699997
03400 DNA repair and recombination proteins [BR:
ccrc03400
]
123699997
DNA replication proteins [BR:
ccrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123699997
DNA repair and recombination proteins [BR:
ccrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123699997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_22
AAA_5
AAA_30
AAA_14
AAA_17
BRCT_2
AAA_33
AAA_16
AAA_19
RuvB_N
RNA_helicase
HTH_NDX
RCF1-5-like_lid
AAA_18
AAA_11
Motif
Other DBs
NCBI-GeneID:
123699997
NCBI-ProteinID:
XP_045503036
LinkDB
All DBs
Position
2:complement(10606809..10619499)
Genome browser
AA seq
990 aa
AA seq
DB search
MSKSIRSYFTVIRKQTTEAKDDSDEIPESPDVQIKNKKKLTRKKRLIEDSDEEIFTPKKK
KTEATSKEKNKNQKSPKATLKEVQITDLFGNGKIKKTEALVVKDKTKKNTETGIHSDDEF
EKSLLELDAPELNETIKIDKEVDDKSSKKKKKSSPKEKDKTTEKLVKNHDKVDKVLNKSE
TDKQNDDFKPNKKSNKRELSEFLEDDDHNTRSKKKKYDTSLNESVLSDEEKHERKRLSAV
LYQKYLHRAGPKNLGSKEMPEGAPNCLKDCAFLLTGVLDSFEREEIVEAITKYGGTVKSG
ISKKVTHVLAGDDAGPAKIAKAESFGIKIITEDQFLRMIKKSINGEEKKDEMKPKIKTEK
EESKAKIDNHGKSKKSSKDNVKSNYFQDNQVNVKNERSVSPKKESIKVKKDTPVEAVKKE
EKVANDSSDVKVSPTKGTTPSLMWVDKYKPTNIKQIIGQHGEASNVKKLMNWLTKWYINR
KAKLAKPNPWAKNDDGGFYKAALLSGPPGVGKTTTVSLVCKELGFDTVEFNASDTRSKNL
IKEQITELLSTTSLSGYARGVTGKQAVTKKHVLVMDEVDGMAGNEDRGGLQELIGLIKST
SVPIICMCNDRNSEKMRSLVNYCYDLRFSRPRVDQIKAAMMSVCFKEGIKIPGDVLSQLI
TAAGQDVRQTLHLLSVWSADPQLADKEHLQKEAQKVKKDIKMGPWEAIRKVFSEEEHKTM
SLNDRSDLFFTDYSLAPLFVQENYLQVAPHCPKREVLDRLSKAADSLSIGDMVDARIRGN
QAWSLLPIQAMYSSVIPGQVMSGHVAGQIQFPGWLGKNSRAGKMARLAQGIHAHTRLSTS
GSKSSIFLDYATHIRDAILNPLIKDKMDGVQQSLQVLEEYHLLREDLDSLTELTVWPGQR
NPMVLVDSKVKAAMTRTYNKQASALPYAPGAIKRAKHTEDTESLEVDDDEEEQDSDPEND
ALIKKKMTKDVEKPSTSKEKGQSSKGKKKK
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagagtattcgatcgtacttcactgttataaggaaacaaactacagaagcaaaa
gatgatagcgatgaaataccagagtcaccagacgttcaaataaaaaataaaaaaaaattg
acacgaaaaaagaggcttatagaggattcagatgaagaaatatttacacctaaaaagaaa
aaaactgaagctacttcaaaagaaaagaataagaatcaaaagagtccaaaagccacttta
aaagaggtacaaattacagacttatttggaaatggtaaaataaagaaaactgaggcttta
gttgtaaaagataaaacaaagaaaaatacagaaactggaattcattccgacgatgaattt
gaaaaaagtctccttgaacttgatgcacctgagctgaatgaaacaattaaaattgacaag
gaggtggatgataaatcatccaaaaaaaaaaagaaatcaagccctaaagaaaaagacaaa
acaactgaaaaacttgtaaagaatcatgataaagttgacaaggtattaaacaaaagtgaa
acagacaaacagaatgatgattttaaaccaaataagaaaagtaacaaaagggaattgagt
gaatttcttgaagatgatgatcacaacacaaggagcaagaagaaaaaatatgacacaagc
cttaatgaatctgttctcagcgatgaagaaaaacatgaaaggaaaagactctcagctgtt
ttatatcaaaagtacttgcacagagctggcccaaagaacttgggatccaaagaaatgcct
gagggagcaccaaattgcttgaaggactgtgcatttctactcactggagtgttggactca
tttgagagggaggaaattgttgaggctataactaaatatggtggtactgtcaaatctgga
ataagcaagaaggtaacacatgtattagcgggcgatgacgctgggcccgctaaaatagcc
aaagcagagtcctttggtattaaaataatcactgaagaccaattcctcagaatgatcaaa
aaatcgataaatggtgaagaaaaaaaagacgaaatgaaacctaaaattaaaaccgaaaaa
gaagaaagcaaagctaaaattgacaatcatggaaaatctaaaaaatcatcgaaagataat
gttaaatctaattatttccaagataatcaagttaatgttaaaaatgaaagatcagtgtca
ccaaaaaaagaaagtatcaaagttaagaaagatacacctgtggaagctgttaaaaaagag
gaaaaagttgcgaatgattcatctgacgtaaaagtatctccaacaaaaggcacaacacca
tcactaatgtgggtggacaagtataagccgacgaatataaagcaaatcattggacagcat
ggagaagctagtaatgttaaaaaattaatgaattggttaacgaaatggtatataaacaga
aaagcgaagttagcaaaaccaaacccttgggccaagaatgatgatggtgggttttataaa
gctgctctgttgtctggtccgccgggagtaggtaaaacaacaacagtgagcctggtgtgt
aaagagttaggtttcgatacagtggaattcaacgcctccgatacgagaagcaagaacctt
attaaagagcagattacggaactactgtctaccacatcactgtctggttatgctagaggt
gtaacaggcaagcaagcagtgaccaagaaacatgttttagtgatggatgaagtagacggc
atggcggggaatgaggatagaggtggtctccaagaactaatagggcttataaaatcaaca
tctgtaccaataatatgcatgtgcaacgacaggaacagtgagaagatgcgctctttagtg
aactactgctacgatctgaggttcagtagaccgagggtggatcagattaaggcggccatg
atgtcggtctgcttcaaggaaggcatcaagatcccaggcgatgtgttatcacaactgata
acagcggctggacaagatgttcgacagacgttacacttgctatctgtatggagtgcggac
ccacagctggctgataaggagcacttgcagaaagaagcccaaaaggtcaagaaggatatt
aaaatgggcccatgggaagcgatacgcaaagttttctctgaggaggagcacaaaacgatg
agcctcaacgaccggagcgatctattcttcacggactacagcctggcgccgttgttcgtg
caagagaattacttgcaagtggcaccgcattgtcccaagcgagaagtattagataggtta
agcaaagccgcggacagtctcagtataggagatatggtcgacgcgaggatacgtggcaat
caggcctggagtcttttgcctatacaggcaatgtacagctcagtaatcccggggcaagtg
atgtcggggcacgttgcggggcagatacagtttcccggctggctcgggaagaactcgcgc
gcgggcaagatggcgagacttgcccagggcattcatgctcatactagacttagcacatct
ggttcgaaatcctctatattcctggactacgcgacacacatacgcgacgccattttgaat
ccgctaatcaaagacaagatggacggcgtccagcagtcgctgcaagtgctggaagagtat
cacctgctgagggaagatctcgattccttgacggagctgaccgtgtggcctgggcaaagg
aatcctatggttttggttgattctaaggtgaaagcagcaatgacgcgcacgtacaacaag
caggctagcgcactgccgtatgcgcccggtgcgatcaaacgagctaaacacacggaagac
actgagtcgcttgaggttgatgatgatgaggaggaacaggatagcgacccggagaatgat
gcacttattaagaaaaagatgacgaaagatgtagagaagccatcaacaagcaaagaaaaa
ggacaatcaagtaaaggaaagaaaaagaaataa
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