Colias croceus (clouded yellow): 123700265
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Entry
123700265 CDS
T08651
Name
(RefSeq) structure-specific endonuclease subunit SLX1 homolog isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
123700265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccrc03400
]
123700265
DNA repair and recombination proteins [BR:
ccrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123700265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
zf-HC5HC2H
T5orf172
zf-HC5HC2H_2
zf-RING-like
C1_2
PHD_NSD
MUG113
Motif
Other DBs
NCBI-GeneID:
123700265
NCBI-ProteinID:
XP_045503391
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Position
19:6879422..6881151
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AA seq
278 aa
AA seq
DB search
MSEPDVVDDFYGVYLLYNINPKYKGRTYIGYTRDPNRRIMQHNRGTWAGGAHRTNNKGPW
KMVLIVHGFPNNISALRFEWAWQNPSKTTRLQHLDLKKIPRKESEFKFKLRVLSEMLRVG
PWVRLPLSIRWLEQEYYEEFPPEKHPPEHMITCYGPVKSRNIKVAENNSVPTLPCKLCSE
SISDKQIKCLNENCNLVAHITCLAEKMLSPGEYIPIDGKCPLCKIYMKWGDLLRKMKGCQ
YIEDKGADGDGSDDEVICTQDKEFVDNNSWFLDCNDDL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccagatgtagttgatgatttttatggtgtttatttactatacaatattaac
cctaaatacaagggtcgcacatacattggttatactagagatccaaatagaagaataatg
cagcataacagaggaacatgggcaggaggggcacatcgaactaataataagggcccttgg
aaaatggtgttgatagtgcatggttttccaaataatatttcagctttgaggtttgaatgg
gcttggcaaaatcccagtaaaacaactaggctgcagcatttagaccttaagaaaatacca
agaaaggagtctgagtttaagtttaagttgagagttttatcagaaatgttgagagttggt
ccttgggtgcgcctgcctttgagtattcgctggctggaacaagaatattatgaagaattc
cctccagaaaagcaccctccagaacacatgattacctgctatggtccagtgaagagcagg
aacattaaagtagctgaaaataactcagtaccaacgctaccttgcaaattatgttcagaa
tctattagtgataaacaaattaaatgcctaaatgagaattgtaatcttgtagcacatata
acatgcttggctgaaaaaatgttatcgccaggggaatatatacccattgatggaaaatgt
ccgttatgcaagatttatatgaaatggggtgatttattaaggaaaatgaagggatgccaa
tatatagaagataagggagcagatggtgatggtagtgatgatgaagtgatatgcactcag
gataaagaatttgttgacaataattcgtggtttctggactgtaatgacgatttatga
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