Colias croceus (clouded yellow): 123700937
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Entry
123700937 CDS
T08651
Name
(RefSeq) general transcription factor IIH subunit 1 isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03022
Basal transcription factors
ccrc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123700937
09124 Replication and repair
03420 Nucleotide excision repair
123700937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123700937
03400 DNA repair and recombination proteins [BR:
ccrc03400
]
123700937
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
123700937
DNA repair and recombination proteins [BR:
ccrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
123700937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
123700937
NCBI-ProteinID:
XP_045504272
LinkDB
All DBs
Position
20:complement(7500723..7512039)
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AA seq
500 aa
AA seq
DB search
MTTSSEDVLLSVNHVRYKKGDGTLYVMNQRLAWMLENRDTVAVSHKYADIKTQKISPAGK
PKVQLQVVLHDGTCSTFHFVNPAGADAQAKDRDQVKMLLQNLLPKFKRQIDGELEMKSRL
LSLHPILKHLYEDLVISKVINSEEYWNTPTLKHYTESTNIKQEAGVSGAFLADIQPQTDG
YNGLKYNLTQDIIDAIFKTYPAVRKKHIDYVPNKMTEAEFWTKFFQSHYFHRDRIASSSS
KDLFGECAKMDDQAIASAMKHTTLDLTVDLPQFTESIPLLPEDDTVEKEKDSNSIHRSMI
KRFNQHSIMVLKASQKANNSSNSSNKSTNNNKVLENGVKETNGVDKRHADESEPVDKKRR
ILEKIHYEDLDDTGDSNSAQELKLTKVERYLLGPSSQISHSTSNTNNPPPLSALSSICQA
WSNGQQCARPVRLGAAAAVGALGELSPGGALMRHHHAACMAQLIPADVKSELGRIYLLGG
ELLRGEMLLVHNVLYTGCNR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactacttcgtccgaggacgttttacttagtgtaaatcatgtgaggtacaaaaaaggt
gatgggactctatacgtgatgaatcaaagactggcctggatgctggagaatcgagacact
gtggctgtctcacacaaatatgcagatattaaaactcaaaagatatctcccgcgggcaaa
ccgaaagtgcaattacaagtagtgctccacgatggcacgtgttcgacgtttcacttcgtc
aacccggcgggggcggacgcgcaggcgaaagatcgggatcaggtgaaaatgttgctgcag
aacttgttgccaaagttcaaacggcagatcgacggggagttggaaatgaaatctagatta
ttatcattgcatcctattctaaagcatttatatgaagacttagttatatcaaaagtaatt
aatagtgaagagtactggaatacaccgactcttaaacattacacggaatctactaatatt
aaacaagaggctggtgtttccggagcattcttagcagacattcaaccgcagactgacggc
tacaacggactgaaatataatctaactcaagatataatagacgcaatattcaaaacatat
cctgcagtgagaaagaaacacatagactatgtgccgaataaaatgacagaagccgagttt
tggaccaagtttttccagtcacattattttcatagggatcgcatagcatcatcgtcaagt
aaagatctatttggtgaatgtgcaaaaatggacgatcaagcgattgcatctgctatgaaa
cacactacattggacctaacggtcgacttacctcaattcacggaatcaataccgctacta
cctgaagacgatacggtcgaaaaagagaaggacagtaattcaatacaccgcagtatgata
aagagatttaaccaacactcaataatggtgctaaaagctagtcaaaaggcaaacaatagt
agtaattcaagtaataaatcaacgaataacaacaaagtattggaaaacggtgtaaaagag
acaaacggagtggacaagagacatgccgatgaatctgaaccagttgataaaaagagaagg
atattagaaaagatacattacgaagatctggatgatacgggcgatagtaatagtgcgcaa
gagttgaaattgactaaggtagaaagatatttattaggtccgtcatcacaaatcagccac
tctacttcgaatacgaacaacccaccgccattgtcagccttatcttctatatgtcaggcg
tggagcaacgggcagcagtgcgcgcggccggtgcggctcggcgccgcggccgcggtcggc
gcgctcggcgagctcagcccgggcggcgcgctcatgcggcaccaccacgcggcctgcatg
gcgcaattaatccccgcggatgttaaatcggaactgggccgcatatacttgttgggcggg
gaactgttgcgcggggaaatgttacttgtacataatgtgctatatacagggtgtaatcgt
taa
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