Colias croceus (clouded yellow): 123701280
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Entry
123701280 CDS
T08651
Name
(RefSeq) protein HBS1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123701280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123701280
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
123701280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
DO-GTPase2
AAA_22
Motif
Other DBs
NCBI-GeneID:
123701280
NCBI-ProteinID:
XP_045504662
LinkDB
All DBs
Position
2:9239809..9242213
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AA seq
689 aa
AA seq
DB search
MARHRNIRNRSYSDDYDYEDVYGHSVEEDSCLSPSDAAQFMYDRSRNQHAISQFIDSHDD
IQEEPEDDDVDNSRPALERRESMDLRGLNLTEDDEAKLMSCLDELRNILGDTLSDNILIQ
TVLKHRFDYSRALDEILNNNKSANDLTNKQQHTDSTRPKVVVEPPIVIPLVDKAPLSIST
VDQTPKVIASKIEKTTPIVKGFQINVDGSTNSRPQTPRDQSPAVDRIQSRNDNLDDSKST
PKVKESKIDPNTKFTNERGSDKEHLYIVVIGHVDAGKSTLMGHLLCELGEVSQRTLHKYE
QESKKIGKQSFMYAWVLDETGEERVRGITMDVGKAQFETKTKKVIILDAPGHADFIPNMI
TGAGQADVALLVVDATRGEFESGFELGGQTREHALLVRSLGVNQLAVAVNKLDTTNWSQE
RFNDIVKKLKAFLKQAGFKDSDVTFVPCSGLTGENLVKTPTEGELIKWYSGPSLLDVIDK
FNVPERPVSRPLRMSINDVFKGTGSGFCVAGRIETGILNKGDKVLVCPSKEIAEVRSLAI
NEFTTNVSFAGDQVAVTLSGVEMQNVSIGYILSDPVNQVPVTTRFEARLVVFNVKVPITK
GYPVLLHHQSLVESAHISKLKALLNKSTGELIKKKPRCLGNNSVALVEIEVCRPICMERY
KDVKELGRVMLRVAGVTIAAGLVTDIYTD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcaccgtaatataagaaacagaagttattctgacgattacgactatgaggat
gtgtatggacattcagttgaagaggactcttgtttatctccaagtgatgctgctcagttt
atgtatgatcgttcacgaaaccagcacgctatatcacagtttatagattctcatgatgat
atacaagaggagccggaagatgatgacgtcgacaattcacggcctgctctcgagcgtcgg
gaatctatggacttgaggggccttaacttaacggaagatgatgaagcaaagcttatgtcg
tgcttggatgaactgcgaaacattttaggtgataccttgtcggataatattcttatacaa
acggtcctaaaacatagatttgattatagtagagcacttgatgaaatattaaataataac
aaatctgccaatgacttgacaaacaaacaacaacataccgattccacacggcctaaagta
gttgttgaaccaccaatagtcattccactagtagataaggctcctctttctatatctacg
gtggaccaaacaccaaaagtaattgcatcaaaaattgaaaagacaacacctatagtaaaa
ggttttcaaattaatgtagatggtagtaccaatagtcgacctcagacacccagagatcag
tctcctgcggtggacagaatacagtctagaaatgacaatttagatgatagtaagtcaacc
ccaaaagttaaagaaagtaaaatagatccaaatacaaaatttaccaatgagagaggttct
gataaagagcatttgtatattgttgttattgggcatgtggatgctggcaagtctacatta
atgggacatttactttgtgagcttggcgaggtcagccaaaggactctacataaatatgag
caggagagcaagaagataggcaagcagagcttcatgtatgcttgggtattggatgaaacc
ggtgaagagagagtacgagggataacaatggatgtcggaaaggctcagtttgaaacaaag
acaaaaaaagtaattatattagatgcaccgggccacgcagactttatcccaaatatgatt
actggcgctggacaagcagatgtggctttgttagtagtagatgctactagaggagaattt
gaatcaggatttgaacttggtggacagaccagggagcatgccctgctggtaaggtctctt
ggagtcaatcagctagctgttgctgtcaacaaattagacaccacaaactggtctcaagag
cgctttaatgatattgttaaaaaattaaaagcatttttaaagcaagctggatttaaagac
tcggatgttacatttgtgccatgttctggtctgacaggggagaatcttgttaaaacccca
actgaaggcgaattaatcaaatggtatagtggtcctagcttgcttgatgtaatagataag
tttaatgtcccagagagacctgtttctaggcctttgcgaatgtccataaatgatgtattt
aaaggcactgggtctggcttctgtgtggctgggcgaatagaaactggaatactgaataaa
ggtgataaagtattggtttgtccttcaaaagagatagccgaggttagaagtcttgctatt
aatgagtttactactaatgtatcatttgctggagaccaggtagctgtgacattgtcagga
gtagaaatgcaaaatgtatcaattggttacatactgagtgatcctgtgaaccaagtgcct
gtaacaacacgatttgaagcccggctcgtagtctttaatgtaaaagtacctattactaaa
ggctatcctgtattacttcatcaccagtcactggtcgaatcggcacacattagtaaactc
aaagcacttttgaataaaagcactggagaattaataaagaaaaaacctagatgcttagga
aataattcagtagccctagtagagattgaggtgtgtaggcctatttgtatggagcgatac
aaagatgtgaaggagttaggaagagtaatgttgcgtgttgcaggtgttacaatagctgct
ggacttgtaactgacatttatacagattga
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