Colias croceus (clouded yellow): 123701625
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Entry
123701625 CDS
T08651
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123701625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123701625
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
123701625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
123701625
NCBI-ProteinID:
XP_045505065
LinkDB
All DBs
Position
2:complement(11108490..11125161)
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AA seq
502 aa
AA seq
DB search
MTTPGASSSAAVQEFKIRVPKNVKKKYHVMRFNATLNVDFAKWTHVKMERENNIKEYKGM
DEDMPKYGAGSEYGRGLREEARRKKFGIISRKYKPEDQPWILKVGGKTGKKFKGIREGGV
SENAAYYVFTHAADGAIDAYPLQEWYNFQPIQRYKALSAEEAEQEFGRRNKVINYFSLMF
RKRMRGDDAADEEDPDEKKTKTSKAKKELKISDMDEWIDSDDDSSGSEGEKEKEDSDSGS
KKKKDKKGAAPKKKKKVEDEAFEESDDGDEEGRERDYISDSSESESDHETKANKELKGVA
EEDALRKLLTSDEDSDSEQEQKQESEQEDEHTKEGEERASKLTKKKKKADDKKESETEFS
SDSDTDPENSGSKKPKKSKSGDKSSANASAPGSASTSRAGTPTPSAAQAAVAAANAHAHS
HQPAKRAKLDPAYTECGVTEEAVRRYLARKPMTTTELLTKFKSKRTGVSSERLVETMTQI
LKRINPVKQNINGKMYLSIKNN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgactactcctggagcctcgtcgtctgcagcggtgcaagagtttaaaatcagagtccca
aaaaatgtaaagaaaaagtatcatgtgatgcggttcaacgctactctaaatgtggatttt
gcaaaatggactcatgtaaagatggagagagagaacaatataaaagaatacaaaggaatg
gatgaggacatgcccaagtatggtgcaggatcagaatatggccgaggtttaagagaagaa
gcaaggaggaagaaatttggtattatttctcgaaaatataaacctgaagatcaaccctgg
atattgaaagtgggaggaaaaacggggaaaaagttcaagggtatccgtgagggaggtgtc
tccgaaaatgcggcatactacgtgttcacgcacgcagctgacggggctattgacgcttat
ccgctgcaagaatggtataatttccaacccattcaaaggtacaaagcattatcggctgag
gaagctgaacaggaatttggcagacgtaacaaagtaataaactacttctcgttgatgttc
cggaagcgaatgcgcggtgacgatgccgcggacgaggaggacccggatgaaaagaaaact
aagacttctaaagctaaaaaagaattgaagatctcggacatggatgaatggatcgactcg
gacgacgactcgtcgggctcggagggtgagaaagagaaggaagatagcgattccggcagt
aagaagaagaaagacaaaaaaggtgccgcacctaaaaagaagaagaaggtagaagacgaa
gcattcgaagagagtgacgatggtgatgaggagggtcgggagagggactacatatcggac
tcctctgagagtgaatcagaccacgagaccaaagccaacaaggaactcaagggtgttgct
gaggaggatgctttaaggaaactcctaacctcagacgaagatagtgactctgagcaggag
cagaaacaagagtcggaacaagaggacgagcacaccaaggagggagaggagagggctagt
aaactcactaagaagaagaagaaggctgatgataaaaaagagtctgaaacagagttcagt
tcggattcggacacggatcccgagaacagcggcagcaagaagccgaagaagagcaaaagt
ggcgataagagttctgctaacgctagtgctccgggcagtgctagtacatcccgcgcaggc
acgccgaccccgagcgctgcgcaggctgcagtggcggcggccaacgcgcatgcgcacagc
caccagcccgccaagcgggccaagctcgacccggcttatacggaatgcggcgtgacagaa
gaagccgtgaggcggtatctagcgcgcaagccaatgacgacaacagaacttctaaccaaa
ttcaaatccaaacgtactggggtcagcagcgaacgactcgtggaaacaatgacgcaaata
ttaaagagaattaacccggtcaaacagaatattaacgggaaaatgtaccttagtattaag
aataattga
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