Colias croceus (clouded yellow): 123702471
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Entry
123702471 CDS
T08651
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123702471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrc03041
]
123702471
Spliceosome [BR:
ccrc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123702471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_EML
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
WD_LRWD1
MIOS_WD40
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
123702471
NCBI-ProteinID:
XP_045506188
LinkDB
All DBs
Position
23:complement(1851234..1878082)
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AA seq
537 aa
AA seq
DB search
MSDDDDVIVIKKPKTVHYGSLEEQEKARLAALAAAAKEGFEDDDGKEMGDIQISNEYMEL
DEEMSRDKKALLEEFERRRKARQLNVSTDDDEVRRSLRQLGEPVCLFGEGPAERRVRLRD
LLSYLGEDAINKKLEEEEARIERDRGREGTWYHEGPPELREARLWIARYSLPRAKRRLMQ
AREELQLAGSIRAAAKQESQRKASAMSIYCSQIGDTRPISFCRFSSDSQMLITSSWSGLV
KVWSVPDCIPLHTLKGHKCNVSSATFHPQATVPHHFLDMIEKNKNKDGAAKLEQNMDAIE
DASESVKMASCSYDGNVHLWNFISDKPLASLEGHSPSRVSRVQFHPSGRFLAASVFDNSW
RLWDLETATEVLHQEGHAKPVYSVSFQCDGSLAATGGMDAFGRVWDLRTGRCVMFLEGHL
GAVLGVDWSPVGHHLATAAADHQTKIWDLRRRACLYTIPAHTHLLSDVRYQKSHGHFLLT
SSYDKTAKLWSNPAWHPLRTLSGHDNKVMSADISMDNKYIATCSYDRTFKLWAPDLV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgatgatgatgtgattgttattaaaaagccaaaaacagtgcactatggatca
ctggaggagcaagaaaaagcgcggctggctgctctggcagccgctgctaaggaaggcttc
gaagatgacgatggaaaagaaatgggagacatacagatatccaatgaatacatggaactc
gacgaagaaatgtcgagggacaaaaaagctctccttgaagagtttgagaggagacggaaa
gctaggcaactgaacgtttctactgatgatgatgaggtgcgtagaagtttacgacagctc
ggcgagccggtgtgcctgttcggagaagggccggccgagaggagggtgcgactgcgagat
ctgctcagttacctaggcgaagacgcgataaataagaagctagaagaagaagaggctcgc
atagagagggacagaggcagagagggaacatggtaccacgaggggccgccggagttgagg
gaagcgaggctctggatagctagatactcgctgccgagggctaagcggaggttaatgcaa
gcccgcgaagagttacaactggcgggtagtataagagcggctgcgaaacaagagtcgcag
aggaaagcgtcggccatgtctatttattgcagtcagattggtgacactcgtcccataagt
ttctgccgcttcagcagtgacagccaaatgttgataacttcaagttggtcaggtctggta
aaggtctggtcggtgccagactgtatccctttacatacgttaaaaggtcacaagtgtaac
gtcagctcagcgaccttccacccgcaggccacggttccacaccattttttggatatgata
gaaaaaaacaaaaacaaagatggcgccgcgaaactagaacaaaatatggacgcaatcgaa
gacgcgtcggagtccgtcaagatggcgtcgtgttcgtatgacggtaacgtgcatctgtgg
aattttattagcgacaaaccgctagcctcgctagaaggccactcgccgtcccgcgtgtcc
cgggttcaattccatccgtcgggcagatttttggcagcaagcgtttttgataactcgtgg
aggctgtgggatttggagactgccacagaagttttgcatcaagagggtcacgcgaaaccc
gtatacagcgtgtccttccagtgcgatggatcgcttgcggctacaggcggcatggacgcg
ttcggtcgtgtatgggacctgcggaccggtcgttgtgtgatgttcctcgagggtcacttg
ggggccgtgctgggggtcgactggtcccccgtgggccaccacttggccaccgcagctgct
gaccatcagacaaaaatctgggatctaaggcgacgcgcctgcctctacacaatacctgcg
cacacgcatttgttaagtgacgtcagataccaaaagagccacggtcactttctgttgacg
tcatcgtacgacaaaaccgccaaattgtggtcgaaccccgcctggcatccactgaggaca
ttatctggacatgataataaggtgatgagtgcagatatttcaatggataataagtacata
gcaacatgttcttacgacagaacatttaaattatgggctccagatttagtatag
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