Colias croceus (clouded yellow): 123702734
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Entry
123702734 CDS
T08651
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123702734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123702734
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
123702734
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
123702734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
Ntox10
Motif
Other DBs
NCBI-GeneID:
123702734
NCBI-ProteinID:
XP_045506477
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All DBs
Position
24:complement(2706721..2707907)
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AA seq
222 aa
AA seq
DB search
MNAEKVKDIGKICIPGMRLSVSNKDNIPGPGTYELKGYIYASLAGVLKMQEDENTKATMI
SVESPKTPSVLPKTGDVVTAKVTVVNSRLVQCLILCVGPSVLVRPYRGILKKEDIRVIDR
DRIDPYKCFRPGDVILARVLPMTEIHWYHLSTAENELGVVIATAEGSPQGVSMVPISWSE
MQCPKTLVKEPRKVARVIPDNINRALLVESKDEKGNLDTNKS
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgaaaaagttaaagatattggtaaaatatgtattcctgggatgagattaagt
gtatcaaataaggacaacatcccaggtcctggaacatatgagcttaaaggatatatatac
gcatctttagcaggagtgttaaaaatgcaagaagatgagaatacaaaggctacaatgata
tcggttgagagccccaaaacccctagtgtgctgccaaaaactggagatgttgtgactgca
aaagttacagtagtgaactcgagattagtacagtgccttatattatgtgtgggcccatca
gtactggtgaggccctatagaggtatcttgaagaaagaggacataagagtgatagacaga
gacagaattgacccttataaatgttttcggccaggcgatgtgattttagctagagtttta
cctatgacggaaatacactggtatcatctatctactgcagagaatgaacttggggttgtc
atagcaacggcagaaggttcaccgcaaggagtcagcatggtaccaattagttggtcggaa
atgcagtgtcccaaaacattagtaaaggaacctaggaaagttgcaagggtcataccagat
aatataaatagagccctgttggttgaaagcaaggatgaaaagggaaatcttgatacaaat
aaaagttga
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