Colias croceus (clouded yellow): 123702890
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Entry
123702890 CDS
T08651
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03013
Nucleocytoplasmic transport
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123702890
09122 Translation
03013 Nucleocytoplasmic transport
123702890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccrc03019
]
123702890
03041 Spliceosome [BR:
ccrc03041
]
123702890
Messenger RNA biogenesis [BR:
ccrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
123702890
Spliceosome [BR:
ccrc03041
]
Complex C
Other components
EJC/TREX
123702890
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
123702890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_EML
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_HPS5
RMC1_N
WDR90_beta-prop_4th
WD40_RFWD3
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
PD40
Beta-prop_EIPR1
Peptidase_S9_N
Beta-prop_NUP159_NUP214
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
123702890
NCBI-ProteinID:
XP_045506692
LinkDB
All DBs
Position
24:complement(1314331..1320406)
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AA seq
329 aa
AA seq
DB search
MKESKVQGQTPIEDLKELRNYFATHNVTREYIAHTSKVHSVGWSCDGRRLASGSFDKTVV
IFNLERSRLVQDFVFRGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDARSHKCAAAIST
KGENINIAWSPNGSTIAVGNKEDLVSFIDARTYKVVTEEQFNFEVNEISWNITSDLFFLT
NGLGCVHILTYPSLEQQTVLKAHPGTCICIEHAPGGRYFATGSADALVSLWDTSELACLR
VFSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVQAATFTVAWHPSRY
LIAYACEDKEPPERKRDTGNLKLWGLSSN
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatcaaaggtccaaggccagacaccaatagaagatctaaaagagctacgtaac
tatttcgcaacacacaatgtgaccagggagtatatagcgcatacttcaaaagtacattcc
gttggctggtcatgcgatggaaggcgcttagcgtcaggttcttttgataagaccgttgtt
attttcaacttggaacggagtagactggtacaagacttcgtgttccgcggccacacaggc
tcggtggaccaactgtgctggcatgcctcacatccagatctcctcagtacagctagtgga
gacaagtctgttagaatatgggatgcacggtcccacaaatgtgcagcagcaatatctaca
aaaggagaaaatataaacatagcctggtctccaaatggctccactatagcagtgggaaat
aaagaggatctagtgtcctttattgatgctcgcacatataaagttgtgacagaagagcaa
ttcaattttgaagtaaatgaaatatcatggaacataacatcagatctcttcttcttaaca
aatggactgggatgtgttcatatattgacgtatccatccctagaacagcaaacagtactg
aaagcgcacccgggcacttgcatatgtatagagcatgcccccggcggtcggtacttcgcg
accggatctgcggacgcgcttgtttcactatgggacactagtgaattggcctgtttaaga
gtgttttctagattagagtggccagtacgaactctatcgttcagtttcgacggaagactg
ctcgcgtcagcaagcgaagatcacattatcgatattggtgacacggaaactggagaaaaa
gtagcagagatccccgtacaagcggcgacattcacagtggcatggcatccctcgagatat
ttaatagcttacgcgtgtgaagacaaagaaccgccagaaagaaaaagagatactggcaac
cttaaactgtggggattgagtagtaactag
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integrated database retrieval system