KEGG   Colias croceus (clouded yellow): 123702890
Entry
123702890         CDS       T08651                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03013  Nucleocytoplasmic transport
ccrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123702890
  09122 Translation
   03013 Nucleocytoplasmic transport
    123702890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccrc03019]
    123702890
   03041 Spliceosome [BR:ccrc03041]
    123702890
Messenger RNA biogenesis [BR:ccrc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     123702890
Spliceosome [BR:ccrc03041]
 Complex C
  Other components
   EJC/TREX
    123702890
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    123702890
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st eIF2A Beta-prop_EML Beta-prop_NOL10_N Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st PAC11 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_HPS5 Tricorn_2nd RMC1_N WDR90_beta-prop_4th WD40_RFWD3 CFAP251_N NBCH_WD40 Beta-prop_SCAP DSE1_N TRM82_WD Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR41 PD40 Peptidase_S9_N Beta-prop_NUP159_NUP214 Beta-prop_ELP1_1st CNH
Other DBs
NCBI-GeneID: 123702890
NCBI-ProteinID: XP_045506692
LinkDB
Position
24
AA seq 329 aa
MKESKVQGQTPIEDLKELRNYFATHNVTREYIAHTSKVHSVGWSCDGRRLASGSFDKTVV
IFNLERSRLVQDFVFRGHTGSVDQLCWHASHPDLLSTASGDKSVRIWDARSHKCAAAIST
KGENINIAWSPNGSTIAVGNKEDLVSFIDARTYKVVTEEQFNFEVNEISWNITSDLFFLT
NGLGCVHILTYPSLEQQTVLKAHPGTCICIEHAPGGRYFATGSADALVSLWDTSELACLR
VFSRLEWPVRTLSFSFDGRLLASASEDHIIDIGDTETGEKVAEIPVQAATFTVAWHPSRY
LIAYACEDKEPPERKRDTGNLKLWGLSSN
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaaagaatcaaaggtccaaggccagacaccaatagaagatctaaaagagctacgtaac
tatttcgcaacacacaatgtgaccagggagtatatagcgcatacttcaaaagtacattcc
gttggctggtcatgcgatggaaggcgcttagcgtcaggttcttttgataagaccgttgtt
attttcaacttggaacggagtagactggtacaagacttcgtgttccgcggccacacaggc
tcggtggaccaactgtgctggcatgcctcacatccagatctcctcagtacagctagtgga
gacaagtctgttagaatatgggatgcacggtcccacaaatgtgcagcagcaatatctaca
aaaggagaaaatataaacatagcctggtctccaaatggctccactatagcagtgggaaat
aaagaggatctagtgtcctttattgatgctcgcacatataaagttgtgacagaagagcaa
ttcaattttgaagtaaatgaaatatcatggaacataacatcagatctcttcttcttaaca
aatggactgggatgtgttcatatattgacgtatccatccctagaacagcaaacagtactg
aaagcgcacccgggcacttgcatatgtatagagcatgcccccggcggtcggtacttcgcg
accggatctgcggacgcgcttgtttcactatgggacactagtgaattggcctgtttaaga
gtgttttctagattagagtggccagtacgaactctatcgttcagtttcgacggaagactg
ctcgcgtcagcaagcgaagatcacattatcgatattggtgacacggaaactggagaaaaa
gtagcagagatccccgtacaagcggcgacattcacagtggcatggcatccctcgagatat
ttaatagcttacgcgtgtgaagacaaagaaccgccagaaagaaaaagagatactggcaac
cttaaactgtggggattgagtagtaactag

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