Colias croceus (clouded yellow): 123702978
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Entry
123702978 CDS
T08651
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123702978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccrc03041
]
123702978
Spliceosome [BR:
ccrc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
123702978
Complex C
U4/U6.U5 tri-SnRNP related factors
123702978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
123702978
NCBI-ProteinID:
XP_045506810
EnsemblRapid:
ENSCEUG00000005010
LinkDB
All DBs
Position
2:complement(1334421..1337155)
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AA seq
323 aa
AA seq
DB search
MMRLKITEYNQQKPAKTSKQHNILPIWGNEQTMNLNPLILANIQGSSYFKVHLFKLKTYH
EVVDEIYYQVKHLEPWERGSRKTAGQTGMCGGVRGVGAGGIVSTAFCLLYKLYTLRLTRK
QVNGLLQHTDSPYIRALGFMYVRYTQPPADLFDWYVHYLDDDEEVDPRAGGGGNTTIGAL
VRQMLIKLDWFSTLFPRIPVPIQKQIEQKLAEHNRQSTSQQNNYRAGNASNYNPGRVDNE
RREHDDRDKRDYGDGDRYAKDRGNRRDDRDQRDKDRDRDRDRRDRDRDTRDRYREKSRSR
DRHRERSRDRPRHRSRSRDRRYR
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgccttaaaattacagaatacaatcagcaaaagccagctaaaacaagcaaacaa
cataacattttaccgatatggggtaatgagcaaactatgaatctgaaccctttaatatta
gcaaatatccaaggttctagctacttcaaagtgcacctatttaagctgaagacatatcat
gaagtagttgacgagatttattaccaggtgaagcacctggagccttgggagcgcggcagc
cgcaagactgctggccaaactggcatgtgtggcggcgttcggggggtgggtgcaggtggc
attgtatcaacagcattctgcctgctgtacaagctgtatacattaagactgactcgcaaa
caggtgaatggactactgcaacacacagattcaccatacattagagctctcggttttatg
tatgtccgctacacacaaccaccggcagacctgtttgactggtatgtgcactatctggac
gatgatgaggaggtggatcctcgagcgggaggtggagggaacacaaccatcggtgctctg
gtgcgacagatgctgatcaagctggattggttcagcacattgtttccgaggatccctgta
cctattcagaaacagattgaacaaaagctagcagaacataacagacagtcgacgtcgcaa
cagaacaactacagagcggggaatgcgagtaactacaacccggggcgcgttgacaacgag
cggcgggaacacgacgatagggacaaacgagattatggggatggtgacaggtacgcaaaa
gacagagggaacagacgcgacgacagagaccaaagggacaaggaccgtgaccgtgaccgc
gaccgccgtgaccgtgaccgtgacacgagggacagataccgcgagaaatcgcgctcgagg
gaccggcaccgcgagcggtcacgtgaccgtccgcggcaccgctcccgttccagggaccgc
cgctatagataa
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