Colias croceus (clouded yellow): 123702996
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Entry
123702996 CDS
T08651
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ccrc
Colias croceus (clouded yellow)
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123702996
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123702996
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
123702996
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
123702996
SLIK complex
123702996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
123702996
NCBI-ProteinID:
XP_045506847
LinkDB
All DBs
Position
1:complement(6734786..6745585)
Genome browser
AA seq
1810 aa
AA seq
DB search
MLLKGYMNESESESTSEKGDKSDSSGSGSGSESDSGSSSSGSASGGNTGSEKSSNPGHSH
YSDDGKLSSKDNYANSSKSDHHSDKDSSDDTISKHKSRNNHGKIKSDLWEDNPDIYGIRR
SGRSRKEPDRLKLADSDSSEKGRSSNRRSRRKSDSWNSDTSDSDSDVKGSPPPPSKRPGQ
RGVPLRKKKPTRRRYTSDEDESTEASDEDTKSRTATRRTGAAVSYKEASDEQTDSSDLLE
VDGIEGEAEAEPEPEEHSETIEKILGFRRGKKGVTGNVTTVYYIEENGDPNEGCNPEDEE
STEPQYLIKWKGWSHIHNTWESENSLTEQKVKGLKKLENYKKKESELSWWRKQAGPEDID
YFECQSELQQELVKSYNFVERIFAEQTRELESGATAHEYFCKWESLPYADSTWEDSTLIE
KRWPEKVREFKSREATTSTPSRHCPVLRRRPKFHQVKEQPDYMGKDKSYILRDYQMDGLN
WLIHSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMTAWQREFT
QWAPDINVVTYIGDVTSRDIIRQFEWSFASSKRLKFNAILTTYEILLKDRQFLRSFSWAC
LLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEE
FEKDHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTAIQKQYYKWIL
TKNYSELRKGVKGSTNTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSG
KLLLLDKLLCRLRETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALD
HFNADGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVN
IYRLVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDASGTSANNPFNKEDLN
AILKFGAEELFKDDDENDEDPVCDIDEILQRAETRDEGPAMAGDELLSAFKVASFAFDEE
KAVMGVKKENAEDESKDWDDIIPDHVRKTLAEQEKTKEMEDLYLPPRRKAQQNNMDNSTE
GGRKRRGRGSENAEAADGEGDADSDVSDADVSADDDRPRKRGRPPASHREKIKGFTDPEI
RRFVKSYKKFSAPLKHLDSIACDAELQEKPLAELKKLGEILQDRCKAVLNDTADASNDHS
DGRKNARKSFKLGGVSVNAKTMAACQDELAPLDDFLPDTKEERLKWQLDFKTRPANFDVD
WGVEDDSKLLAGIYQYGMGSWEAIKMDSSFGIGEKMLTNEDKKPQAKHLQSRADYLLKLI
KKLLDQKNGKQKQRKPRVKKGTKEPVTKDIVEDDGSSGEDHKKNTRSGRNDKNDKGKLKM
EEVLTHDEASNDRKEKDKKRTKKEGKDRTKNDKSKKSKKPAGPMHFTANNEPRALEVLGD
LDPSVFEECKEKMRPVKKALRALDNPDQTLTETEQVSRTRACLSQIGNQIDICVEAYPDP
EKKVEWRSNLWYFVSKFTNFDAKQLYRLYKYGLKKSDSKHKDGKHKENVKSNIRNNFNSN
NHVKSFKKEAKGDENAERKEKRPKIGREKFDKNEKNAHASGVKRKLEEGECDPDPENKRH
ERHKHKDRKHREGSLKRDDLSYRERSRSERERDRDRERDRDRDRERDRDRERDRDRSRTR
RDSGGGGPRVRQPYTPHAHPEHAHGHAPHSAHAGHPAWTPPAYPGPRQYRGDRNPRTHDK
RSRFGGYPPMGGPYSGYYEGSPMAGGMGFPPVRPYPDDWRGYAQPEYPYDEREYEREVYR
RDYDRRAPPT
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgaaaggctacatgaatgaatctgaaagtgagtcgacaagtgaaaagggtgac
aagagtgactcaagtggatctggatcaggcagtgagagtgacagtgggtcaagttcttct
ggatctgcatctgggggaaatacgggctcagaaaaatcttcaaatccaggacactcacac
tacagcgacgatggaaagttatcatccaaagataattatgctaattcttctaaatctgat
caccattctgataaagattcttctgatgataccatctcaaaacataaatcaagaaataat
cacggaaaaataaaatctgatctttgggaggacaatcctgatatttatggaataagaaga
tcagggcggtcgcgtaaagagccggacagattgaaattggctgatagtgattcaagtgaa
aaaggaagaagtagtaatagaagaagtagaaggaaaagtgattcctggaattcagatacc
tcagacagtgatagtgatgtaaaaggatcaccaccaccaccttcaaagaggcctggccaa
agaggtgttcctctaagaaaaaagaaacctacaagaagaagatatactagtgatgaagat
gagagcactgaagcatcagatgaagacacaaaaagtcgtacagctacgcgtcgaactggg
gcagctgttagttacaaagaagcgagcgatgaacaaacagactcatctgatttattggaa
gttgatggcattgaaggagaggcagaagctgaacctgaacctgaagaacacagtgagacg
atagaaaaaattttaggatttcggcgcggcaagaaaggagtcacgggaaatgtgactaca
gtttactatattgaagaaaatggggatccgaatgagggttgcaatcctgaggatgaagaa
agtacagaaccacagtacctgataaagtggaagggttggtcccatatacacaacacatgg
gagtcagaaaattcacttactgaacaaaaagtcaaaggtctgaaaaagttagaaaactat
aagaaaaaggaatctgaattatcgtggtggagaaagcaagctggtccagaagacatagac
tattttgaatgccaatctgaactgcaacaagaacttgttaagtcatataattttgttgag
aggatatttgcggaacaaacgcgagaacttgaaagtggcgcaactgcccatgaatatttc
tgtaagtgggaatcattaccatatgctgattcgacatgggaagattctactcttattgaa
aaaagatggccagagaaagttagagagtttaaatcaagagaagcaacaacatcaacacca
tctagacattgtcctgtactgagaagaagaccaaaattccatcaagtaaaagaacaacca
gattatatgggaaaggataagtcttacatattaagagattatcaaatggatgggctgaat
tggttgatacattcctggtgtaaagacaattctgttattttggctgatgaaatgggttta
ggtaaaacaattcagacaatctgcttcctgtactatctgttcaaatctcaacaattgtat
ggaccatttctatgcgtagtacctttaagtacaatgactgcgtggcaaagagaatttaca
cagtgggcacctgatataaatgtggttacatacattggtgatgtaacaagtagagatatt
ataaggcaatttgaatggagttttgcaagttctaaaaggctgaaatttaatgcaatatta
accacttatgaaattttactaaaagatagacagtttttaagatcttttagctgggcatgc
ttgcttgttgatgaagcacataggttaaaaaatgacgattcacttctatataaggcactt
aaagagtttgatacaaatcataggttattagtcactggtactcctttacaaaattctctg
aaagaattatgggctctcctgcattttattatgccatataagtttgaatcatgggaagaa
tttgaaaaagatcatgaagatgctgcaacaaaaggttatgaaaaacttcacaaacaatta
gaaccatttattttgagaagacaaaagaaagatgttgaaaaatcattgccagctaaagta
gaacaaatattaagagtagaaatgactgcaatacaaaagcaatattacaaatggatactt
acaaaaaactatagtgaattacgaaaaggtgttaagggatcaaccaatacctttataaat
attgtgatagaattaaaaaaatgttgtaatcatgcactattgactaaacctgaagatttt
gagtcacgagcatctcttgctacaactgatgctgtagagaaacttttaagaggttccgga
aaattgttattgttagataaactattatgcaggctaagagaaacaggacatagagtattg
attttctcacaaatggttagaatgttagatatattagctgaatatttacaaagaagacat
tttccatttcaacgccttgatggcagcataaaaggagaattaaggaagcaggctttagat
cattttaatgcagatggatctcaagatttttgttttcttctttcaactagggctggaggc
cttggtattaatttggcaactgctgatactgtcataatttttgattctgattggaatcct
caaaatgatctgcaggctcaggctcgtgcacatagaatagggcaaaagaatcaggtcaac
atttatcggttggtaactgccaggtctgtggaagaagacatagtagagagggctaaacga
aagatggtgcttgatcatcttgttattcaaagaatggacactactggcaggactgttctt
aacaaacgagacgcatctggtacaagtgctaacaatcctttcaataaagaagacttaaat
gcaattttgaaatttggtgctgaagaactctttaaagatgatgatgaaaatgatgaagat
ccagtttgtgatattgatgaaatcttacaaagagctgaaactcgtgatgagggacctgca
atggctggcgatgagctactgtctgcattcaaagtagctagctttgcatttgatgaagaa
aaggcggttatgggagttaaaaaggaaaatgcagaagatgaaagcaaagactgggatgac
atcataccagatcatgttagaaaaacactggccgaacaggagaaaacgaaagagatggaa
gatttatacttaccaccacgcagaaaggcacaacaaaataatatggataacagtacagaa
ggcggtcgcaagcgtcgtggccggggcagtgagaacgcggaggccgcggacggtgaaggc
gacgccgacagcgacgtgtcggacgcggatgtcagtgctgatgacgaccggcccaggaag
aggggccgaccgccggctagccatagagagaaaataaaaggcttcactgaccctgagata
agacgatttgtaaagagctataaaaaattctcggcgccattgaagcatttggacagtata
gcgtgtgatgctgaattacaagaaaaaccgctggcggaattgaaaaaattgggagaaatt
ttacaagataggtgcaaggctgttttgaatgatactgcagatgcttcaaatgatcatagt
gacggtcgaaagaatgcaagaaagtcgtttaaactcggcggcgtgtcagttaatgcgaaa
actatggcggcatgccaagatgaacttgcgccactcgacgatttcctacctgataccaag
gaggaaagactgaagtggcagttagatttcaaaacgagaccagctaactttgatgtcgac
tggggagtagaagatgactctaaactacttgcaggcatttatcagtatggaatgggatcc
tgggaggctataaaaatggattcttcatttggtattggtgaaaaaatgttgacaaatgag
gataaaaaaccccaagcgaagcatttacagtctagagcagattatttactcaaacttatt
aaaaagttgctcgaccagaaaaatggcaaacaaaagcaaagaaagcctagagtgaaaaag
ggtacaaaagaaccagtaactaaagatattgtcgaagatgatggaagttctggtgaagat
cataaaaagaatactcgtagtggtagaaatgataaaaatgataagggtaaactcaaaatg
gaagaagttttaacacatgatgaagcatcaaatgacagaaaggaaaaagataagaaacgc
acaaagaaagaagggaaggatcggaccaaaaatgataaaagcaaaaaaagtaaaaagcct
gctggcccaatgcactttactgctaataatgagccaagggctttagaagttttaggggat
ttagatccatcagtttttgaagagtgtaaagaaaagatgagaccagtgaagaaagcacta
agagcactagacaaccctgatcaaacattgacagaaacagaacaagtatcaagaacaagg
gcttgcctttcacaaatagggaatcaaatagatatatgtgtagaagcctatcctgatcca
gaaaagaaagtagaatggagaagtaatctctggtactttgtgtctaagttcacaaacttt
gatgcaaaacagttgtataggttatataagtacggccttaagaaaagcgacagtaaacat
aaagacggcaagcataaggaaaatgtcaaatcaaatattagaaacaacttcaattcaaat
aatcatgttaagtctttcaaaaaagaggctaaaggagatgaaaacgcagagcgtaaagag
aagcgaccgaagattggccgcgaaaagtttgataagaacgaaaagaatgcacatgcatct
ggtgttaagagaaaattagaagagggtgaatgtgaccctgatcctgaaaataaaagacac
gaaagacataagcataaggatcgcaagcacagggaagggagtctgaagcgagatgatttg
tcctacagagagcgcagtcggagcgagcgggagagggaccgggacagggagcgagatcga
gatagagatagagagcgggacagggatagggaacgtgacagggatcggtcgcggacgagg
agggacagcggcggcggcgggccgcgcgtgcgccagccctacacgccgcacgcgcacccc
gagcacgcgcacggccacgcgccgcactcggcgcacgccggccacccggcctggacgccg
cccgcctaccccggcccgaggcagtaccgcggcgaccgcaaccccaggacacatgataag
agaagcaggttcggcggatatcctcccatggggggcccgtacagcgggtactacgagggc
tcgccgatggcgggcggcatgggcttcccgcccgtgcgcccctacccggacgactggcgc
ggctacgcgcagcccgagtacccgtacgatgagcgggagtacgagcgcgaggtctacaga
agagactacgatcgccgcgcgccacccacatag
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