KEGG   Colias croceus (clouded yellow): 123703364
Entry
123703364         CDS       T08651                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03020  RNA polymerase
ccrc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123703364
  09124 Replication and repair
   03420 Nucleotide excision repair
    123703364
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccrc03021]
    123703364
   03400 DNA repair and recombination proteins [BR:ccrc03400]
    123703364
Transcription machinery [BR:ccrc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     123703364
DNA repair and recombination proteins [BR:ccrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      123703364
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Cas12f1-like_TNB Zn_Ribbon_TF Zn_ribbon_IS1595 RIM2a_ZnF Zn_ribbon_GRF_2 DUF7351 TRASH_HVO_1752_C HVO_0758 DZR Zn_ribbon_Elf1 Zn_ribbon_Top1
Other DBs
NCBI-GeneID: 123703364
NCBI-ProteinID: XP_045507244
LinkDB
Position
2:complement(1428942..1431882)
AA seq 126 aa
MTLNLGRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNK
IMHEVDELTHINPDVVSDPTLPRTKDHTCPKCNHREAVFFQGQTRRAEEEMRLYYVCTSC
KHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atgacactaaatcttggaagaaaagacggtggcccgggatacgttggtattcagttctgt
caagaatgcaataacatgctttacccgcgcgaagataaaaacaacaaagttttgttatac
gcttgtagaaattgcgattacaagcaacttgcagattccaactgtgtgtacgtaaacaaa
attatgcacgaagttgatgaattgactcatataaatcctgatgtcgttagtgacccaact
ctaccccgtacgaaggatcatacgtgtccaaaatgcaatcacagagaagctgtattcttc
cagggtcaaactagacgagctgaagaagagatgaggctctattatgtatgtacaagttgc
aaacatagatggactgagtga

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