Colias croceus (clouded yellow): 123705636
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Entry
123705636 CDS
T08651
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
123705636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccrc03021
]
123705636
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123705636
Transcription machinery [BR:
ccrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
123705636
Coactivators
SAGA/TFTC/STAGA complex
123705636
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
123705636
STAGA complex
123705636
TFTC complex
123705636
SAGA complex
123705636
SLIK complex
123705636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
123705636
NCBI-ProteinID:
XP_045510483
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All DBs
Position
2:6879640..6896990
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AA seq
640 aa
AA seq
DB search
MGDSDSGYGSAVTVDSIKVIAESVGIANLGDDAAKDLADDVTFRLKVIVQDAMKFMHHSK
RQKLSIADIDHTLKIKNIEPQYGFIQPDSLPFRFATGGGRELHFIEEKEIDLSEILSAPP
PKIPLDVSLRAHWLSVDGVQPTVPENPPPLSKEAQKLESVDPITKLSKPANKDSAGKPVC
GKAARLKASESVHVKQLATHELSVEQQLYYKEITEACVGSDEGRRAEALQSLACDPGLHE
MLPRMCTFISEGVKVNVVQNNLALLIYLMRMVKALLDNQSLYLEKYLHELIPSVSTCIVS
RQLCMRPEVDNHWALRDFAARLMAQICKTFNTSTNNLQTRVTRLFSRALQCPSQTNSESG
PSMVTTMKESEKTPLASLYGAVQGLAELGPEVVKVFILPRVRWLGERVEGALSGIGGADR
LAAGNLKHQLLKVLAPVVRQLRQPPDLPDDYKRDYGYLGPSLQQMVGKLRASPSASGGGG
AVAVVTCTPPLVPAAPAPAPSASHQATKTVDSLATRNVISSNTPQSPAPSTPPPQKFVIV
SQQKPQQTQPASGASHIVVHSSQPTIVRSQNVQSVVVTSGPAGNQQPQKVVVVGMPPQQP
AAAVGGVSQAPVSVVAKPVFARGSGAPQPPPELDDLSHLA
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcggattccggatacggctctgccgttactgtagattctataaaagttatt
gctgaaagtgtgggcattgcaaatctcggtgatgatgctgcaaaggatttagcggatgat
gttacatttcgtctcaaagtaatcgttcaagatgcaatgaagtttatgcatcattccaaa
agacaaaaactttcaattgctgatatagaccatactttaaaaattaaaaatattgagcca
caatatggatttatacaaccagattcactaccatttagatttgcgacaggaggtggaagg
gaacttcattttattgaagagaaggaaatagacttatctgaaatattatctgcacctcct
cctaaaatccctcttgatgtttcacttagagcccattggttgagtgttgatggggttcaa
ccaactgttcccgagaatccacctccactgtctaaagaagcacagaagttggagtctgtc
gaccctataacaaaattaagcaaacctgccaataaagattctgcaggtaaaccagtatgt
ggtaaagctgctagattgaaggcttctgaatcagtacatgttaaacagcttgcaacccat
gagttgagtgtggaacaacagttgtactataaagagataactgaagcttgtgttggcagt
gatgaaggaaggcgtgctgaagctctgcaatctcttgcttgtgaccctggtcttcacgaa
atgttaccaaggatgtgcaccttcatttctgaaggtgttaaagttaatgttgtgcaaaac
aaccttgctcttctcatatacttgatgcggatggttaaggcattactggacaatcaatct
ctatatcttgagaaatatttgcatgaattaataccatcagtatcaacatgcatagtttcc
cggcagctatgtatgaggccggaagtagataatcattgggcattaagggactttgctgcc
cggctcatggcacagatttgtaaaacatttaatacttccacaaacaatttacaaacaaga
gtaacaaggttgttctctagggcattacaatgtccatctcaaacaaatagtgagtcaggt
ccatctatggtaaccactatgaaagaatctgagaaaacaccacttgcatctctgtatggt
gcagtacagggcttagccgaattgggccctgaagttgttaaggtgttcatcctgccgcgc
gtgcgttggctgggcgagcgcgtggagggcgcgctgagcggcatcggcggcgcggaccgg
ctcgccgccggcaacctcaagcaccagctgctcaaggtgctcgcgcccgtcgtgcgccag
ctgcggcagccgcccgacctgcccgatgactacaagcgtgactacggctacctggggccc
agcctgcagcagatggtgggcaagctgcgcgcgtcgccgtcggcgagcggcggcggcggc
gcggtggccgtggtgacgtgcacgccgccgctcgtgcccgccgcgcccgcgcccgcgccc
tccgcctcgcaccaagccaccaagactgttgattccttggcgactcgtaatgtgataagt
tccaatacgccgcagtcgccagcgccgtccacgccaccaccgcagaagtttgtcattgtt
tcacagcaaaaaccacagcagacgcaacccgctagcggtgcgagccatattgtggtacat
agttcgcagccgacaattgttcgtagccaaaacgttcagtcggtggtggtgacgagcggg
ccggccggcaaccagcagccgcagaaggtggtggtggtgggcatgccgccgcagcagccc
gccgccgccgtggggggcgtcagccaggcgccagtatcggtggtcgcgaagccggtgttc
gcgcgcgggtcgggcgccccgcagccgccgcccgaactcgacgacctgtcgcacctcgcc
tga
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