KEGG   Colias croceus (clouded yellow): 123705743
Entry
123705743         CDS       T08651                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
ccrc  Colias croceus (clouded yellow)
Pathway
ccrc03030  DNA replication
ccrc03410  Base excision repair
ccrc03420  Nucleotide excision repair
ccrc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123705743
   03410 Base excision repair
    123705743
   03420 Nucleotide excision repair
    123705743
   03430 Mismatch repair
    123705743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccrc03032]
    123705743
   03036 Chromosome and associated proteins [BR:ccrc03036]
    123705743
   03400 DNA repair and recombination proteins [BR:ccrc03400]
    123705743
DNA replication proteins [BR:ccrc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    123705743
  DNA Replication Termination Factors
   ELG1-RFC complex
    123705743
Chromosome and associated proteins [BR:ccrc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    123705743
DNA repair and recombination proteins [BR:ccrc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     123705743
  Check point factors
   HRAD17(Rad24)-RFC complex
    123705743
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 AAA_30 AAA_24 RuvB_N Gp44_lid AAA_11 Mg_chelatase AAA_14 Rad17 DEAD bpMoxR Effector_1 AAA_assoc_2 AAA_3 AAA_19 DUF815 SLFN-g3_helicase AAA_5 DUF3373 AAA_7 AAA_23
Other DBs
NCBI-GeneID: 123705743
NCBI-ProteinID: XP_045510693
LinkDB
Position
2:8808345..8821794
AA seq 350 aa
MQAFLKTGKITASDKASTSGVKSTKKKPPAPWVEKYRPKTIDDIVDQGEVVQVLRECLSG
SDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFAQL
TVSNTKPDGRPCPAYKLVILDEADSMTNAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLREICGSEGVDVGEGEVLHQAVDTCDGDLRRALTALQCC
QRLLGKITAEGLIEVTGLVPDKLVNEYLSTKNYSELEQFVEKFLMDAYSASQLLEQLSAT
VVNSGHLTNKQKCSISEKLAVCSHRLLDGGAEVMQLTDLGCTIIMANNNP
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcaggcatttttaaagacaggtaaaatcaccgcttctgataaagcaagcacttcgggt
gtaaaatccactaagaagaaacctccagcaccatgggttgaaaaataccgcccgaaaact
attgacgatattgtggatcaaggagaggttgtgcaagttttgagggaatgcttatctggc
agtgatttgcctcatctcttgttttacggaccacccggaacaggaaaaaccagtgcgata
ttagcagcagctcgacaactctttggtgatattactcgggaccgtgttttagaattaaat
gcttcagatgaacgcggaattcaagttattagggacaaagtgaaatcatttgctcagtta
actgttagtaacactaaaccagatggcagaccatgtccagcatataaactggtgatcctc
gatgaagcagactccatgacgaacgcagcacaagcagctctccgtagaacaatggagaga
gagactcgcacaacccgtttctgtctcatttgcaactatgtatcgagaattattcctcca
attactagtagatgctctaagttcagatttaagccgttggctagagaaaatgttataaaa
agattgcgtgaaatatgcggctcagaaggtgtagatgtcggcgagggtgaggtcctacac
caggcggtagacacttgtgatggggaccttcgtcgtgcactcacagctttgcagtgctgt
cagcgactactcggcaagatcactgctgagggacttattgaggtgacagggctggttcca
gataaattagtcaatgaatatttgagtaccaaaaactacagtgaattggagcaatttgta
gaaaagtttctaatggacgcctattccgcatctcagttgttagagcagttgagtgcgaca
gtggtgaacagcggccatttgacgaacaaacagaagtgctctataagcgagaagctcgca
gtttgctcccacaggctgctagatggcggcgctgaagtcatgcaactcacagacttgggc
tgcactatcataatggccaataataacccctaa

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