Colias croceus (clouded yellow): 123705743
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Entry
123705743 CDS
T08651
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
ccrc
Colias croceus (clouded yellow)
Pathway
ccrc03030
DNA replication
ccrc03410
Base excision repair
ccrc03420
Nucleotide excision repair
ccrc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123705743
03410 Base excision repair
123705743
03420 Nucleotide excision repair
123705743
03430 Mismatch repair
123705743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccrc03032
]
123705743
03036 Chromosome and associated proteins [BR:
ccrc03036
]
123705743
03400 DNA repair and recombination proteins [BR:
ccrc03400
]
123705743
DNA replication proteins [BR:
ccrc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
123705743
DNA Replication Termination Factors
ELG1-RFC complex
123705743
Chromosome and associated proteins [BR:
ccrc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
123705743
DNA repair and recombination proteins [BR:
ccrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
123705743
Check point factors
HRAD17(Rad24)-RFC complex
123705743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_16
AAA_22
AAA_30
AAA_24
RuvB_N
Gp44_lid
AAA_11
Mg_chelatase
AAA_14
Rad17
DEAD
bpMoxR
Effector_1
AAA_assoc_2
AAA_3
AAA_19
DUF815
SLFN-g3_helicase
AAA_5
DUF3373
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
123705743
NCBI-ProteinID:
XP_045510693
LinkDB
All DBs
Position
2:8808345..8821794
Genome browser
AA seq
350 aa
AA seq
DB search
MQAFLKTGKITASDKASTSGVKSTKKKPPAPWVEKYRPKTIDDIVDQGEVVQVLRECLSG
SDLPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFAQL
TVSNTKPDGRPCPAYKLVILDEADSMTNAAQAALRRTMERETRTTRFCLICNYVSRIIPP
ITSRCSKFRFKPLARENVIKRLREICGSEGVDVGEGEVLHQAVDTCDGDLRRALTALQCC
QRLLGKITAEGLIEVTGLVPDKLVNEYLSTKNYSELEQFVEKFLMDAYSASQLLEQLSAT
VVNSGHLTNKQKCSISEKLAVCSHRLLDGGAEVMQLTDLGCTIIMANNNP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttttaaagacaggtaaaatcaccgcttctgataaagcaagcacttcgggt
gtaaaatccactaagaagaaacctccagcaccatgggttgaaaaataccgcccgaaaact
attgacgatattgtggatcaaggagaggttgtgcaagttttgagggaatgcttatctggc
agtgatttgcctcatctcttgttttacggaccacccggaacaggaaaaaccagtgcgata
ttagcagcagctcgacaactctttggtgatattactcgggaccgtgttttagaattaaat
gcttcagatgaacgcggaattcaagttattagggacaaagtgaaatcatttgctcagtta
actgttagtaacactaaaccagatggcagaccatgtccagcatataaactggtgatcctc
gatgaagcagactccatgacgaacgcagcacaagcagctctccgtagaacaatggagaga
gagactcgcacaacccgtttctgtctcatttgcaactatgtatcgagaattattcctcca
attactagtagatgctctaagttcagatttaagccgttggctagagaaaatgttataaaa
agattgcgtgaaatatgcggctcagaaggtgtagatgtcggcgagggtgaggtcctacac
caggcggtagacacttgtgatggggaccttcgtcgtgcactcacagctttgcagtgctgt
cagcgactactcggcaagatcactgctgagggacttattgaggtgacagggctggttcca
gataaattagtcaatgaatatttgagtaccaaaaactacagtgaattggagcaatttgta
gaaaagtttctaatggacgcctattccgcatctcagttgttagagcagttgagtgcgaca
gtggtgaacagcggccatttgacgaacaaacagaagtgctctataagcgagaagctcgca
gtttgctcccacaggctgctagatggcggcgctgaagtcatgcaactcacagacttgggc
tgcactatcataatggccaataataacccctaa
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